Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Uncharacterised protein family UPF0016

Term: IPR001727  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog2_v2.0_unigene1498 biogeco2 v2.0 476
• AutoFact: UPF0016 protein 5 [Arabidopsis thaliana] sp|Q9SX28.1|GDT15_ARATH RecName: Full=GDT1-like protein 5 gb|AAD49978.1|AC008075_11 Is a member of PF|01169 Uncharacterized (transmembrane domain) protein family [Arabidopsis thaliana] dbj|BAC43336.1| putative tran 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transmembrane protein 0.0
N-terminus
biog2_v2.0_unigene3389 biogeco2 v2.0 384
• AutoFact: UPF0016 protein 5 [Arabidopsis thaliana] sp|Q9SX28.1|GDT15_ARATH RecName: Full=GDT1-like protein 5 gb|AAD49978.1|AC008075_11 Is a member of PF|01169 Uncharacterized (transmembrane domain) protein family [Arabidopsis thaliana] dbj|BAC43336.1| putative tran 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transmembrane protein 0.0
C-terminus
biog2_v2.0_unigene7453 biogeco2 v2.0 480
• AutoFact: UPF0016 protein 3 [Arabidopsis thaliana] ref|NP_851098.1| UPF0016 protein 3 [Arabidopsis thaliana] sp|Q93Y38.1|GDT13_ARATH RecName: Full=GDT1-like protein 3; Flags: Precursor gb|AAK96668.1| transmembrane protein FT27/PFT27-like [Arabidopsis thaliana] gb|A 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: membrane protein 0.0
Putative N-terminus
biog2_v2.0_unigene11429 biogeco2 v2.0 174
• AutoFact: UPF0016 protein 5 [Arabidopsis thaliana] sp|Q9SX28.1|GDT15_ARATH RecName: Full=GDT1-like protein 5 gb|AAD49978.1|AC008075_11 Is a member of PF|01169 Uncharacterized (transmembrane domain) protein family [Arabidopsis thaliana] dbj|BAC43336.1| putative tran 0.0
• Blast2go: transmembrane protein 0.0
unknown
biog2_v2.0_unigene13324 biogeco2 v2.0 406
• AutoFact: Nop14 multi-domain protein 7.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pre-rrna-processing protein esf1-like 0.0
Putative C-terminus
biog2_v2.0_unigene13963 biogeco2 v2.0 345
• AutoFact: Transmembrane protein TPARL, putative n=1 Tax=Ricinus communis RepID=B9RWP5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein 0.0
C-terminus
biog2_v2.0_unigene14687 biogeco2 v2.0 200
• AutoFact: UPF0016 protein 3 [Arabidopsis thaliana] ref|NP_851098.1| UPF0016 protein 3 [Arabidopsis thaliana] sp|Q93Y38.1|GDT13_ARATH RecName: Full=GDT1-like protein 3; Flags: Precursor gb|AAK96668.1| transmembrane protein FT27/PFT27-like [Arabidopsis thaliana] gb|A 0.0
• Blast2go: membrane protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain