Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Leucine-rich repeat, cysteine-containing subtype

Term: IPR006553  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog2_v2.0_unigene143 biogeco2 v2.0 685
• AutoFact: putative F-box and leucine-rich repeat protein [Jatropha curcas] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box lrr-repeat protein 2-like 0.0
Putative C-terminus
biog2_v2.0_unigene184 biogeco2 v2.0 504
• AutoFact: Grr1, plant, putative n=1 Tax=Ricinus communis RepID=B9SET7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ein3-binding f-box protein 1-like 0.0
Internal
biog2_v2.0_unigene1221 biogeco2 v2.0 293
• AutoFact: Cyclin-like F-box [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box family protein 0.0
Internal
biog2_v2.0_unigene1556 biogeco2 v2.0 638
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box lrr-repeat protein 14 0.0
Putative N-terminus
biog2_v2.0_unigene1582 biogeco2 v2.0 646
• AutoFact: EIN3-binding F-box protein 1 n=1 Tax=Solanum lycopersicum RepID=Q2PQJ0_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ein3-binding f-box protein 1-like 0.0
Internal
biog2_v2.0_unigene1727 biogeco2 v2.0 1073
• AutoFact: uncharacterized protein [Arabidopsis thaliana] sp|Q9STN5.1|Y4833_ARATH RecName: Full=Uncharacterized protein At4g08330, chloroplastic; Flags: Precursor emb|CAB52555.1| putative protein [Arabidopsis thaliana] emb|CAB77958.1| putative protein [Arabidopsis t 3.0e-26
• FL-Next: sp=Uncharacterized protein At4g08330, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: uncharacterized protein chloroplastic-like 1.75428e-36
Putative Complete
biog2_v2.0_unigene2239 biogeco2 v2.0 428
• AutoFact: F-box/LRR-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9STU0_RICCO 0.0
• FL-Next: sp=F-box protein SKIP1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: f-box protein skip1 0.0
C-terminus
biog2_v2.0_unigene2275 biogeco2 v2.0 557
• AutoFact: Cyclin-like F-box [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box family protein 0.0
C-terminus
biog2_v2.0_unigene3520 biogeco2 v2.0 638
• AutoFact: Grr1, plant, putative n=1 Tax=Ricinus communis RepID=B9SET7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ein3-binding f-box protein 1-like 0.0
Internal
biog2_v2.0_unigene3889 biogeco2 v2.0 374
• AutoFact: Unassigned protein
• FL-Next: sp=Uncharacterized protein At4g08330, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: uncharacterized protein chloroplastic-like 0.0
Putative N-terminus
biog2_v2.0_unigene4313 biogeco2 v2.0 803
• AutoFact: F-box/LRR-repeat protein 5 [Arabidopsis thaliana] ref|NP_001185415.1| F-box/LRR-repeat protein 5 [Arabidopsis thaliana] sp|O49286.1|SKP2B_ARATH RecName: Full=F-box protein SKP2B; AltName: Full=F-box/LRR-repeat protein 5; Short=AtFB5; AltName: Full=SKP2-li 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box protein fbl2 0.0
C-terminus
biog2_v2.0_unigene4387 biogeco2 v2.0 606
• AutoFact: F-box/LRR-repeat protein 5 [Arabidopsis thaliana] ref|NP_001185415.1| F-box/LRR-repeat protein 5 [Arabidopsis thaliana] sp|O49286.1|SKP2B_ARATH RecName: Full=F-box protein SKP2B; AltName: Full=F-box/LRR-repeat protein 5; Short=AtFB5; AltName: Full=SKP2-li 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box protein fbl2 0.0
Internal
biog2_v2.0_unigene4567 biogeco2 v2.0 682
• AutoFact: F-box/LRR-repeat protein 15 [Arabidopsis thaliana] sp|Q9SMY8.2|FBL15_ARATH RecName: Full=F-box/LRR-repeat protein 15 gb|AEE86191.1| F-box/LRR-repeat protein 15 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
biog2_v2.0_unigene7208 biogeco2 v2.0 636
• AutoFact: EIN3-binding F-box protein 1 n=1 Tax=Solanum lycopersicum RepID=Q2PQJ0_SOLLC 0.0
• Blast2go: ein3-binding f-box protein 1-like 0.0
unknown
biog2_v2.0_unigene7316 biogeco2 v2.0 451
• AutoFact: F-box/LRR-repeat protein 15 [Arabidopsis thaliana] sp|Q9SMY8.2|FBL15_ARATH RecName: Full=F-box/LRR-repeat protein 15 gb|AEE86191.1| F-box/LRR-repeat protein 15 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
biog2_v2.0_unigene7668 biogeco2 v2.0 777
• AutoFact: F-box/LRR-repeat protein 15 [Arabidopsis thaliana] sp|Q9SMY8.2|FBL15_ARATH RecName: Full=F-box/LRR-repeat protein 15 gb|AEE86191.1| F-box/LRR-repeat protein 15 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
biog2_v2.0_unigene7808 biogeco2 v2.0 601
• AutoFact: F-box/LRR-repeat protein 3 [Arabidopsis thaliana] sp|Q8RWU5.1|FBL3_ARATH RecName: Full=F-box/LRR-repeat protein 3 gb|AAM14053.1| putative F-box protein family, AtFBL3 [Arabidopsis thaliana] gb|AAM67471.1| putative F-box family protein AtFBL3 [Arabidopsis 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
biog2_v2.0_unigene8640 biogeco2 v2.0 301
• AutoFact: Grr1, plant, putative n=1 Tax=Ricinus communis RepID=B9SET7_RICCO 0.0
• Blast2go: ein3-binding f-box protein 1-like 0.0
unknown
biog2_v2.0_unigene8692 biogeco2 v2.0 366
• AutoFact: EIN3-binding F-box protein 1 n=1 Tax=Solanum lycopersicum RepID=Q2PQJ0_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ein3-binding f-box protein 1-like 0.0
Internal
biog2_v2.0_unigene9304 biogeco2 v2.0 739
• AutoFact: putative F-box and leucine-rich repeat protein [Jatropha curcas] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box lrr-repeat protein 2-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain