Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Ribosomal protein L40e

Term: IPR001975  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene3094 biogeco2 v2.0 635
AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin fusion protein 0.0
Complete
biog2_v2.0_unigene3446 biogeco2 v2.0 128
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
Blast2go: polyubiquitin 10 0.0
unknown
biog2_v2.0_unigene5396 biogeco2 v2.0 514
AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin a-52 residue ribosomal protein fusion product 1 0.0
Complete
biog2_v2.0_unigene5664 biogeco2 v2.0 1102
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: sp=Polyubiquitin 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: polyubiquitin 10 0.0
Complete
biog2_v2.0_unigene6084 biogeco2 v2.0 290
AutoFact: polyubiquitin [Zea mays] gb|AAB21994.1| polyubiquitin [Zea mays] gb|AAQ07454.1| ubiquitin [Musa acuminata] dbj|BAD45891.1| polyubiquitin [Oryza sativa Japonica Group] gb|EEC81187.1| hypothetical protein OsI_24193 [Oryza sativa Indica Group] gb|EEE66229.1| 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: ubiquitin 0.0
Putative Complete
biog2_v2.0_unigene6216 biogeco2 v2.0 584
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: polyubiquitin 10 0.0
Putative Complete
biog2_v2.0_unigene6316 biogeco2 v2.0 375
AutoFact: [O] COG5272 Ubiquitin 8.0e-36
FL-Next: sp=Ubiquitin; Avena sativa (Oat). 0.0
Blast2go: ubiquitin 1.4013e-45
Complete
biog2_v2.0_unigene6341 biogeco2 v2.0 286
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Blast2go: polyubiquitin 0.0
Putative Complete
biog2_v2.0_unigene6420 biogeco2 v2.0 701
AutoFact: putative polyubiquitin [Arabidopsis lyrata] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: ubiquitin-like protein 0.0
Complete
biog2_v2.0_unigene6426 biogeco2 v2.0 399
AutoFact: Ubiquitin n=2 Tax=Dictyosteliida RepID=D3AVZ4_POLPA 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-like protein 8.40779e-45
N-terminus
biog2_v2.0_unigene11210 biogeco2 v2.0 250
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 7.0e-35
Blast2go: ubiquitin 4.48416e-44
unknown
biog2_v2.0_unigene12812 biogeco2 v2.0 1144
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: sp=Polyubiquitin 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: polyubiquitin 10 0.0
Complete
biog2_v2.0_unigene18200 biogeco2 v2.0 124
AutoFact: Ubiquitin [Medicago truncatula] 0.0
Blast2go: polyubiquitin 10 0.0
unknown
biog2_v2.0_unigene18588 biogeco2 v2.0 727
AutoFact: [O] COG5272 Ubiquitin 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: polyubiquitin 0.0
Complete
biog2_v2.0_unigene18621 biogeco2 v2.0 1154
AutoFact: polyubiquitin [Pinus sylvestris] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: polyubiquitin 0.0
Putative Complete
biog2_v2.0_unigene19461 biogeco2 v2.0 159
AutoFact: Ubiquitin family protein n=1 Tax=Trichinella spiralis RepID=E5RYS0_TRISP 5.0e-11
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Blast2go: polyubiquitine protein 2.41135e-11
Internal
biog2_v2.0_unigene19523 biogeco2 v2.0 794
AutoFact: Polyubiquitin 8 n=1 Tax=Arabidopsis thaliana RepID=UBQ8_ARATH 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: polyubiquitin 3 0.0
Putative Complete
biog2_v2.0_unigene19918 biogeco2 v2.0 1235
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: sp=Polyubiquitin 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: polyubiquitin 10 0.0
Complete
biog2_v2.0_unigene19934 biogeco2 v2.0 477
AutoFact: Ubiquitin family protein n=3 Tax=Tetrahymena thermophila RepID=UPI00006CC966 0.0
FL-Next: sp=Ubiquitin; Avena sativa (Oat). 0.0
Blast2go: polyubiquitin 0.0
Complete
biog2_v2.0_unigene19947 biogeco2 v2.0 240
AutoFact: Ubiquitin, putative n=5 Tax=Chromadorea RepID=A8NSV0_BRUMA 7.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin 3.63181e-23
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain