Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco2 v2.0

Name: Brix domain

Term: IPR007109  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene360 biogeco2 v2.0 809
AutoFact: putative U3 snoRNP protein IMP4 [Oryza sativa Japonica Group] dbj|BAG87578.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u3 small nucleolar ribonucleoprotein protein 0.0
Internal
biog2_v2.0_unigene888 biogeco2 v2.0 1184
AutoFact: ribosomal RNA processing brix domain-containing protein [Arabidopsis thaliana] gb|AAF35412.1| unknown protein [Arabidopsis thaliana] dbj|BAB02375.1| unnamed protein product [Arabidopsis thaliana] gb|AAM64370.1| unknown [Arabidopsis thaliana] gb|AEE75679.1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: brix domain-containing protein 0.0
Complete
biog2_v2.0_unigene4286 biogeco2 v2.0 452
AutoFact: pfam04427, Brix, Brix domain 1.0e-34
FL-Next: sp=Ribosome production factor 2 homolog; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: ribosome production factor 2 homolog 0.0
C-terminus
biog2_v2.0_unigene7670 biogeco2 v2.0 348
AutoFact: Peter Pan-like protein [Arabidopsis thaliana] ref|NP_974976.1| Peter Pan-like protein [Arabidopsis thaliana] dbj|BAB10077.1| unnamed protein product [Arabidopsis thaliana] gb|AED97515.1| Peter Pan-like protein [Arabidopsis thaliana] gb|AED97516.1| Peter P 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peter pan-like protein 0.0
Internal
biog2_v2.0_unigene8711 biogeco2 v2.0 299
AutoFact: ribosomal RNA processing brix domain-containing protein [Arabidopsis thaliana] gb|AAF35412.1| unknown protein [Arabidopsis thaliana] dbj|BAB02375.1| unnamed protein product [Arabidopsis thaliana] gb|AAM64370.1| unknown [Arabidopsis thaliana] gb|AEE75679.1 0.0
Blast2go: brix domain-containing protein 0.0
Putative coding
biog2_v2.0_unigene9908 biogeco2 v2.0 390
AutoFact: putative U3 snoRNP protein IMP4 [Oryza sativa Japonica Group] dbj|BAG87578.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
Blast2go: u3 small nucleolar ribonucleoprotein protein 0.0
unknown
biog2_v2.0_unigene11843 biogeco2 v2.0 537
AutoFact: putative U3 snoRNP protein IMP4 [Oryza sativa Japonica Group] dbj|BAG87578.1| unnamed protein product [Oryza sativa Japonica Group] 4.0e-11
Blast2go: protein 3.30427e-15
unknown
biog2_v2.0_unigene12027 biogeco2 v2.0 341
AutoFact: pfam04427, Brix, Brix domain 1.0e-34
Blast2go: ribosome production factor 2 homolog 0.0
unknown
biog2_v2.0_unigene18029 biogeco2 v2.0 345
AutoFact: Peter Pan-like protein [Arabidopsis thaliana] ref|NP_974976.1| Peter Pan-like protein [Arabidopsis thaliana] dbj|BAB10077.1| unnamed protein product [Arabidopsis thaliana] gb|AED97515.1| Peter Pan-like protein [Arabidopsis thaliana] gb|AED97516.1| Peter P 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peter pan-like protein 0.0
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain