Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Uncharacterised domain CHP00451

Term: IPR004521  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog2_v2.0_unigene2026 biogeco2 v2.0 275
• AutoFact: rRNA intron-encoded homing endonuclease [Oryza sativa] 7.0e-17
• FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
• Blast2go: rrna intron-encoded homing endonuclease 0.0
Putative Complete
biog2_v2.0_unigene2740 biogeco2 v2.0 974
• AutoFact: MLL [Hordeum vulgare subsp. vulgare] gb|ACK99544.1| MCT-1 [Hordeum vulgare subsp. vulgare] gb|ACK99545.1| MCT-1 [Hordeum vulgare] emb|CBI83389.1| MCT-1 like PUA RNA binding-domain containing protein [Hordeum vulgare subsp. vulgare] emb|CBI83391.1| MCT-1 l 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: mct-1 like pua rna binding-domain containing protein 0.0
Complete
biog2_v2.0_unigene9609 biogeco2 v2.0 645
• AutoFact: H/ACA ribonucleoprotein complex subunit 4 [Arabidopsis thaliana] sp|Q9LD90.1|DKC1_ARATH RecName: Full=H/ACA ribonucleoprotein complex subunit 4; AltName: Full=Nopp-140-associated protein of 57 kDa homolog; Short=AtNAP57; AltName: Full=Nucleolar protein NA 0.0
• FL-Next: sp=H/ACA ribonucleoprotein complex subunit 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Internal
biog2_v2.0_unigene15899 biogeco2 v2.0 78
• AutoFact: rRNA intron-encoded homing endonuclease [Oryza sativa] 7.0e-17
• Blast2go: rrna intron-encoded homing endonuclease 0.0
Putative ncRNA
biog2_v2.0_unigene17960 biogeco2 v2.0 39
• AutoFact: rRNA intron-encoded homing endonuclease [Oryza sativa] 7.0e-17
• Blast2go: rrna intron-encoded homing endonuclease 0.0
Putative ncRNA
biog2_v2.0_unigene18309 biogeco2 v2.0 141
• AutoFact: MLL [Hordeum vulgare subsp. vulgare] gb|ACK99544.1| MCT-1 [Hordeum vulgare subsp. vulgare] gb|ACK99545.1| MCT-1 [Hordeum vulgare] emb|CBI83389.1| MCT-1 like PUA RNA binding-domain containing protein [Hordeum vulgare subsp. vulgare] emb|CBI83391.1| MCT-1 l 0.0
• Blast2go: mct-1 like pua rna binding-domain containing protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain