Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Paraneoplastic encephalomyelitis antigen

Term: IPR002343  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene251 biogeco2 v2.0 418
AutoFact: Flowering time control protein-like protein (Fragment) n=1 Tax=Picea sitchensis RepID=E0ZL31_PICSI 7.0e-11
Blast2go: flowering time control protein 2.21199e-12
unknown
biog2_v2.0_unigene1007 biogeco2 v2.0 833
AutoFact: putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa Japonica Group] dbj|BAD17631.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
biog2_v2.0_unigene1758 biogeco2 v2.0 1030
AutoFact: nucleic acid binding protein1 [Zea mays] gb|AAA33486.1| nucleic acid-binding protein [Zea mays] gb|ACG38158.1| ribonucleoprotein [Zea mays] gb|ACL52389.1| unknown [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 31 kda chloroplastic-like 0.0
C-terminus
biog2_v2.0_unigene3595 biogeco2 v2.0 460
AutoFact: Heterogeneous nuclear ribonucleoprotein A1/A3 n=2 Tax=Arabidopsis RepID=Q9FM47_ARATH 7.0e-38
Blast2go: rna recognition motif-containing protein 0.0
Coding
biog2_v2.0_unigene6112 biogeco2 v2.0 1577
AutoFact: poly(A)-binding protein [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly -binding protein 0.0
Complete
biog2_v2.0_unigene7247 biogeco2 v2.0 785
AutoFact: poly(A)-binding protein [Daucus carota] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
biog2_v2.0_unigene9974 biogeco2 v2.0 535
AutoFact: Ribonucleoprotein, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9RNK5_RICCO 9.99995e-41
Blast2go: 28 kda chloroplastic-like 0.0
unknown
biog2_v2.0_unigene10206 biogeco2 v2.0 459
AutoFact: poly(A)-binding protein [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly -binding protein 0.0
Putative Complete
biog2_v2.0_unigene11852 biogeco2 v2.0 323
AutoFact: poly(A)-binding protein [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly -binding protein 0.0
Internal
biog2_v2.0_unigene13297 biogeco2 v2.0 132
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9S3Y1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: rna binding 0.0
Internal
biog2_v2.0_unigene14123 biogeco2 v2.0 373
AutoFact: poly(A)-binding protein [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly -binding protein 0.0
Putative N-terminus
biog2_v2.0_unigene16001 biogeco2 v2.0 270
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9S3Y1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding 0.0
N-terminus
biog2_v2.0_unigene16998 biogeco2 v2.0 192
AutoFact: Flowering time control protein-like protein (Fragment) n=1 Tax=Picea sitchensis RepID=E0ZL31_PICSI 7.0e-11
Blast2go: flowering time control protein 2.21199e-12
unknown
biog2_v2.0_unigene17693 biogeco2 v2.0 1422
AutoFact: poly(A)-binding protein [Daucus carota] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog2_v2.0_unigene17952 biogeco2 v2.0 126
AutoFact: Heterogeneous nuclear ribonucleoprotein A1/A3 n=2 Tax=Arabidopsis RepID=Q9FM47_ARATH 7.0e-38
Blast2go: rna recognition motif-containing protein 0.0
unknown
biog2_v2.0_unigene18984 biogeco2 v2.0 466
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AEE27574.1| RNA recognition motif-containing protein [Arabidopsis thaliana] 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 9.46524e-34
C-terminus
biog2_v2.0_unigene19595 biogeco2 v2.0 494
AutoFact: poly(A)-binding protein [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly -binding protein 0.0
C-terminus
biog2_v2.0_unigene19835 biogeco2 v2.0 657
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAB03120.1| unnamed protein product [Arabidopsis thaliana] gb|AAL85976.1| unknown protein [Arabidopsis thaliana] gb|AAM67536.1| unknown protein [Arabidopsis thaliana] dbj|BAD94504.1| hypo 0.0
Blast2go: heterogeneous nuclear ribonucleoprotein 0.0
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain