Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Ribosomal protein 60S

Term: IPR001813  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene521 biogeco2 v2.0 506
AutoFact: 60S acidic ribosomal protein P3-1 n=2 Tax=Arabidopsis RepID=RLA31_ARATH 8.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein p3 2.61989e-27
C-terminus
biog2_v2.0_unigene1539 biogeco2 v2.0 815
AutoFact: 60S acidic ribosomal protein P1 [Zea mays] gb|AAB71079.1| acidic ribosomal protein P1a [Zea mays] gb|ACG31544.1| 60S acidic ribosomal protein P1 [Zea mays] gb|ACR38189.1| unknown [Zea mays] 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein p1 8.6505e-30
Complete
biog2_v2.0_unigene1924 biogeco2 v2.0 1585
AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein p0 0.0
Complete
biog2_v2.0_unigene3423 biogeco2 v2.0 915
AutoFact: Chain t, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZ5|UU Chain u, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tr 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein p1 1.95579e-29
Complete
biog2_v2.0_unigene6101 biogeco2 v2.0 669
AutoFact: non-specific phospholipase C6 [Arabidopsis thaliana] dbj|BAC22511.1| phosphatidylglycerol specific phospholipase C [Arabidopsis thaliana] gb|AEE78437.1| non-specific phospholipase C6 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog2_v2.0_unigene7347 biogeco2 v2.0 333
AutoFact: 60S acidic ribosomal protein P3-1 n=2 Tax=Arabidopsis RepID=RLA31_ARATH 8.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein p3 2.61989e-27
N-terminus
biog2_v2.0_unigene8476 biogeco2 v2.0 807
AutoFact: non-specific phospholipase C6 [Arabidopsis thaliana] dbj|BAC22511.1| phosphatidylglycerol specific phospholipase C [Arabidopsis thaliana] gb|AEE78437.1| non-specific phospholipase C6 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene10880 biogeco2 v2.0 137
AutoFact: non-specific phospholipase C6 [Arabidopsis thaliana] dbj|BAC22511.1| phosphatidylglycerol specific phospholipase C [Arabidopsis thaliana] gb|AEE78437.1| non-specific phospholipase C6 [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene17436 biogeco2 v2.0 231
AutoFact: non-specific phospholipase C6 [Arabidopsis thaliana] dbj|BAC22511.1| phosphatidylglycerol specific phospholipase C [Arabidopsis thaliana] gb|AEE78437.1| non-specific phospholipase C6 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene17757 biogeco2 v2.0 542
AutoFact: 60S acidic ribosomal protein P3-1 n=2 Tax=Arabidopsis RepID=RLA31_ARATH 5.0e-11
Blast2go: 60s acidic ribosomal protein p3 1.32677e-21
unknown
biog2_v2.0_unigene18304 biogeco2 v2.0 666
AutoFact: 60s acidic ribosomal protein [Hyacinthus orientalis] 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein 3.98882e-30
Complete
biog2_v2.0_unigene18610 biogeco2 v2.0 1232
AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein p0 0.0
Complete
biog2_v2.0_unigene18627 biogeco2 v2.0 704
AutoFact: non-specific phospholipase C6 [Arabidopsis thaliana] dbj|BAC22511.1| phosphatidylglycerol specific phospholipase C [Arabidopsis thaliana] gb|AEE78437.1| non-specific phospholipase C6 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog2_v2.0_unigene19425 biogeco2 v2.0 92
AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max] 0.0
Blast2go: 60s acidic ribosomal protein p0 0.0
unknown
biog2_v2.0_unigene19461 biogeco2 v2.0 159
AutoFact: Ubiquitin family protein n=1 Tax=Trichinella spiralis RepID=E5RYS0_TRISP 5.0e-11
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Blast2go: polyubiquitine protein 2.41135e-11
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain