Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Uncharacterised protein family UPF0136, Transmembrane

Term: IPR005349  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog2_v2.0_unigene3632 biogeco2 v2.0 455
• AutoFact: transmembrane protein 14C [Arabidopsis thaliana] gb|AAK91438.1| AT3g43520/T18D12_90 [Arabidopsis thaliana] gb|AAN18102.1| At3g43520/T18D12_90 [Arabidopsis thaliana] gb|AEE77802.1| transmembrane protein 14C [Arabidopsis thaliana] 9.0e-17
• FL-Next: sp=UPF0136 membrane protein At2g26240; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Complete
biog2_v2.0_unigene8373 biogeco2 v2.0 451
• AutoFact: Transmembrane proteins 14C [Arabidopsis thaliana] gb|AAK62581.1| AT3g57280/F28O9_130 [Arabidopsis thaliana] gb|AAK96447.1| AT3g57280/F28O9_130 [Arabidopsis thaliana] gb|AAM62547.1| unknown [Arabidopsis thaliana] gb|AEE79635.1| Transmembrane proteins 14C [ 5.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
biog2_v2.0_unigene9247 biogeco2 v2.0 80
• AutoFact: transmembrane protein 14C [Arabidopsis thaliana] gb|AAK91438.1| AT3g43520/T18D12_90 [Arabidopsis thaliana] gb|AAN18102.1| At3g43520/T18D12_90 [Arabidopsis thaliana] gb|AEE77802.1| transmembrane protein 14C [Arabidopsis thaliana] 9.0e-17
• Blast2go: protein 0.0
unknown
biog2_v2.0_unigene9817 biogeco2 v2.0 228
• AutoFact: Transmembrane proteins 14C [Arabidopsis thaliana] gb|AAK62581.1| AT3g57280/F28O9_130 [Arabidopsis thaliana] gb|AAK96447.1| AT3g57280/F28O9_130 [Arabidopsis thaliana] gb|AAM62547.1| unknown [Arabidopsis thaliana] gb|AEE79635.1| Transmembrane proteins 14C [ 5.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene11461 biogeco2 v2.0 303
• AutoFact: Transmembrane proteins 14C [Arabidopsis thaliana] gb|AAG50780.1|AC079027_3 unknown protein [Arabidopsis thaliana] gb|AAL69479.1| unknown protein [Arabidopsis thaliana] gb|AAM20362.1| unknown protein [Arabidopsis thaliana] gb|AAM64911.1| unknown [Arabidops 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transmembrane proteins 14c 0.0
Putative Complete
biog2_v2.0_unigene12721 biogeco2 v2.0 630
• AutoFact: Putative non-green plastid inner envelope membrane protein n=3 Tax=Arabidopsis RepID=Q9ZVH7_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: non-green plastid inner envelope membrane protein 0.0
C-terminus
biog2_v2.0_unigene13156 biogeco2 v2.0 646
• AutoFact: Putative non-green plastid inner envelope membrane protein n=3 Tax=Arabidopsis RepID=Q9ZVH7_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: non-green plastid inner envelope membrane protein 0.0
Putative N-terminus
biog2_v2.0_unigene14471 biogeco2 v2.0 420
• AutoFact: transmembrane protein 14C [Arabidopsis thaliana] gb|AAK91438.1| AT3g43520/T18D12_90 [Arabidopsis thaliana] gb|AAN18102.1| At3g43520/T18D12_90 [Arabidopsis thaliana] gb|AEE77802.1| transmembrane protein 14C [Arabidopsis thaliana] 9.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative N-terminus
biog2_v2.0_unigene15946 biogeco2 v2.0 312
• AutoFact: Transmembrane proteins 14C [Arabidopsis thaliana] gb|AAK62581.1| AT3g57280/F28O9_130 [Arabidopsis thaliana] gb|AAK96447.1| AT3g57280/F28O9_130 [Arabidopsis thaliana] gb|AAM62547.1| unknown [Arabidopsis thaliana] gb|AEE79635.1| Transmembrane proteins 14C [ 5.0e-31
• Blast2go: protein 0.0
Coding
biog2_v2.0_unigene19180 biogeco2 v2.0 439
• AutoFact: Putative non-green plastid inner envelope membrane protein n=3 Tax=Arabidopsis RepID=Q9ZVH7_ARATH 0.0
• Blast2go: non-green plastid inner envelope membrane protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain