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Assembly Name: biogeco2 v2.0

Name: Ubiquitin system component Cue

Term: IPR003892  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene437 biogeco2 v2.0 682
AutoFact: E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana] ref|NP_849552.1| E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana] sp|Q8VYC8.1|RIN2_ARATH RecName: Full=E3 ubiquitin protein ligase RIN2; AltName: Full=AMF receptor-like protein 1A; AltName: Fu 0.0
Blast2go: protein 0.0
Coding
biog2_v2.0_unigene1561 biogeco2 v2.0 1102
AutoFact: Ubiquitin system component Cue protein [Arabidopsis thaliana] gb|AAN13090.1| unknown protein [Arabidopsis thaliana] gb|AED93879.1| Ubiquitin system component Cue protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin system component cue protein 0.0
C-terminus
biog2_v2.0_unigene1585 biogeco2 v2.0 625
AutoFact: 5'-AMP-activated protein kinase-like protein [Arabidopsis thaliana] gb|AED94476.1| 5'-AMP-activated protein kinase-like protein [Arabidopsis thaliana] 6.0e-20
Blast2go: protein 4.62352e-36
unknown
biog2_v2.0_unigene5580 biogeco2 v2.0 746
AutoFact: uncharacterized protein [Arabidopsis thaliana] ref|NP_001184898.1| uncharacterized protein [Arabidopsis thaliana] gb|AAC72125.1| ESTs gb|H36966, gb|R65511, gb|T42324 and gb|T20569 come from this gene [Arabidopsis thaliana] gb|AEE27554.1| uncharacterized p 5.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
C-terminus
biog2_v2.0_unigene7294 biogeco2 v2.0 684
AutoFact: uncharacterized protein [Arabidopsis thaliana] ref|NP_001184898.1| uncharacterized protein [Arabidopsis thaliana] gb|AAC72125.1| ESTs gb|H36966, gb|R65511, gb|T42324 and gb|T20569 come from this gene [Arabidopsis thaliana] gb|AEE27554.1| uncharacterized p 5.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
N-terminus
biog2_v2.0_unigene7660 biogeco2 v2.0 398
AutoFact: E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana] ref|NP_849552.1| E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana] sp|Q8VYC8.1|RIN2_ARATH RecName: Full=E3 ubiquitin protein ligase RIN2; AltName: Full=AMF receptor-like protein 1A; AltName: Fu 0.0
FL-Next: sp=E3 ubiquitin protein ligase RIN2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene8252 biogeco2 v2.0 665
AutoFact: 5'-AMP-activated protein kinase-like protein [Arabidopsis thaliana] gb|AED94476.1| 5'-AMP-activated protein kinase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog2_v2.0_unigene9257 biogeco2 v2.0 476
AutoFact: E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana] ref|NP_849552.1| E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana] sp|Q8VYC8.1|RIN2_ARATH RecName: Full=E3 ubiquitin protein ligase RIN2; AltName: Full=AMF receptor-like protein 1A; AltName: Fu 0.0
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene10479 biogeco2 v2.0 421
AutoFact: uncharacterized protein [Arabidopsis thaliana] ref|NP_001184898.1| uncharacterized protein [Arabidopsis thaliana] gb|AAC72125.1| ESTs gb|H36966, gb|R65511, gb|T42324 and gb|T20569 come from this gene [Arabidopsis thaliana] gb|AEE27554.1| uncharacterized p 5.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Internal
biog2_v2.0_unigene10901 biogeco2 v2.0 376
AutoFact: Ubiquitin system component Cue protein [Arabidopsis thaliana] gb|AAN13090.1| unknown protein [Arabidopsis thaliana] gb|AED93879.1| Ubiquitin system component Cue protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin system component cue protein 0.0
C-terminus
biog2_v2.0_unigene14271 biogeco2 v2.0 373
AutoFact: Unassigned protein
Blast2go: cue domain containing expressed 5.52462e-07
unknown
biog2_v2.0_unigene16307 biogeco2 v2.0 348
AutoFact: E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana] ref|NP_849552.1| E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana] sp|Q8VYC8.1|RIN2_ARATH RecName: Full=E3 ubiquitin protein ligase RIN2; AltName: Full=AMF receptor-like protein 1A; AltName: Fu 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
biog2_v2.0_unigene16971 biogeco2 v2.0 183
AutoFact: uncharacterized protein [Arabidopsis thaliana] ref|NP_001184898.1| uncharacterized protein [Arabidopsis thaliana] gb|AAC72125.1| ESTs gb|H36966, gb|R65511, gb|T42324 and gb|T20569 come from this gene [Arabidopsis thaliana] gb|AEE27554.1| uncharacterized p 5.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Internal
biog2_v2.0_unigene18893 biogeco2 v2.0 578
AutoFact: Ubiquitin system component Cue protein [Arabidopsis thaliana] gb|AAN13090.1| unknown protein [Arabidopsis thaliana] gb|AED93879.1| Ubiquitin system component Cue protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin system component cue protein 0.0
C-terminus
biog2_v2.0_unigene18994 biogeco2 v2.0 320
AutoFact: uncharacterized protein [Arabidopsis thaliana] ref|NP_001184898.1| uncharacterized protein [Arabidopsis thaliana] gb|AAC72125.1| ESTs gb|H36966, gb|R65511, gb|T42324 and gb|T20569 come from this gene [Arabidopsis thaliana] gb|AEE27554.1| uncharacterized p 5.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain