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Assembly Name: biogeco2 v2.0

Name: NADH:ubiquinone/plastoquinone oxidoreductase

Term: IPR001750  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene373 biogeco2 v2.0 1022
AutoFact: DUF1777 multi-domain protein 1.0e-15
FL-Next: sp=Splicing factor U2af large subunit B; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: splicing factor u2af large subunit b 0.0
C-terminus
biog2_v2.0_unigene1996 biogeco2 v2.0 621
AutoFact: RecName: Full=Splicing factor U2af large subunit B; AltName: Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa subunit B; AltName: Full=U2 small nuclear ribonucleoprotein auxiliary factor large subunit B; Short=U2 snRNP auxiliary factor large subun 0.0
Blast2go: protein 0.0
Coding
biog2_v2.0_unigene3149 biogeco2 v2.0 1174
AutoFact: RecName: Full=Splicing factor U2af large subunit B; AltName: Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa subunit B; AltName: Full=U2 small nuclear ribonucleoprotein auxiliary factor large subunit B; Short=U2 snRNP auxiliary factor large subun 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene3466 biogeco2 v2.0 1453
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SWE4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at4g38150-like 0.0
Complete
biog2_v2.0_unigene5780 biogeco2 v2.0 365
AutoFact: NADH-ubiquinone oxidoreductase chain 4 n=35 Tax=Magnoliophyta RepID=NU4M_ARATH 0.0
Blast2go: nadh dehydrogenase subunit 4 0.0
unknown
biog2_v2.0_unigene10680 biogeco2 v2.0 446
AutoFact: DUF1777 multi-domain protein 1.0e-15
Blast2go: splicing factor u2af large subunit b 0.0
unknown
biog2_v2.0_unigene13457 biogeco2 v2.0 222
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein orf134; Nicotiana tabacum (Common tobacco). Mitochondrion. 0.0
C-terminus
biog2_v2.0_unigene13636 biogeco2 v2.0 310
AutoFact: RecName: Full=Splicing factor U2af large subunit B; AltName: Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa subunit B; AltName: Full=U2 small nuclear ribonucleoprotein auxiliary factor large subunit B; Short=U2 snRNP auxiliary factor large subun 0.0
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene13669 biogeco2 v2.0 349
AutoFact: NADH-ubiquinone oxidoreductase chain 5 n=325 Tax=Magnoliophyta RepID=NU5M_ARATH 0.0
FL-Next: sp=NADH-ubiquinone oxidoreductase chain 5; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: nadh dehydrogenase subunit 5 0.0
C-terminus
biog2_v2.0_unigene14844 biogeco2 v2.0 477
AutoFact: NADH-ubiquinone oxidoreductase chain 4 n=35 Tax=Magnoliophyta RepID=NU4M_ARATH 0.0
FL-Next: sp=NAD(P)H-quinone oxidoreductase chain 4, chloroplastic 2; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). Plastid; Chloroplast. 0.0
Blast2go: nadh dehydrogenase subunit 4 0.0
Internal
biog2_v2.0_unigene15009 biogeco2 v2.0 515
AutoFact: NADH-ubiquinone oxidoreductase chain 4 n=35 Tax=Magnoliophyta RepID=NU4M_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nadh dehydrogenase subunit 4 0.0
Complete
biog2_v2.0_unigene17873 biogeco2 v2.0 424
AutoFact: RecName: Full=Splicing factor U2af large subunit B; AltName: Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa subunit B; AltName: Full=U2 small nuclear ribonucleoprotein auxiliary factor large subunit B; Short=U2 snRNP auxiliary factor large subun 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain