Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Zinc finger, HIT-type

Term: IPR007529  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog2_v2.0_unigene7831 biogeco2 v2.0 588
• AutoFact: HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] dbj|BAC42342.1| unknown protein [Arabidopsis thaliana] gb|AEE33398.1| HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
biog2_v2.0_unigene8731 biogeco2 v2.0 701
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_156.assembly12x (Fragment) n=3 Tax=Vitis vinifera RepID=D7TNX1_VITVI 0.0
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: hit-type zinc finger family protein 0.0
N-terminus
biog2_v2.0_unigene12369 biogeco2 v2.0 500
• AutoFact: HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] dbj|BAC42342.1| unknown protein [Arabidopsis thaliana] gb|AEE33398.1| HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] 0.0
Coding
biog2_v2.0_unigene16994 biogeco2 v2.0 415
• AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AAU94374.1| At1g56440 [Arabidopsis thaliana] gb|AAX12885.1| At1g56440 [Arabidopsis thaliana] dbj|BAE99447.1| hypothetical protein [Arabidopsis thaliana] gb|AEE33395.1| tetratrico 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna polymerase ii-associated protein 3-like 0.0
N-terminus
biog2_v2.0_unigene17380 biogeco2 v2.0 432
• AutoFact: zinc finger protein [Nicotiana benthamiana] 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger hit domain-containing protein 1 0.0
C-terminus
biog2_v2.0_unigene17601 biogeco2 v2.0 257
• AutoFact: HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] dbj|BAC42342.1| unknown protein [Arabidopsis thaliana] gb|AEE33398.1| HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] 7.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain