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Assembly Name: biogeco2 v2.0

Name: Cytochrome c oxidase biogenesis protein Cmc1-like

Term: IPR013892  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene822 biogeco2 v2.0 745
AutoFact: cytochrome c oxidase biogenesis protein Cmc1-like protein [Arabidopsis thaliana] ref|NP_001078418.1| cytochrome c oxidase biogenesis protein Cmc1-like protein [Arabidopsis thaliana] dbj|BAE99808.1| hypothetical protein [Arabidopsis thaliana] gb|AEE84418.1 2.0e-27
FL-Next: tr=Putative uncharacterized protein Sb06g017710; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: cytochrome c oxidase biogenesis protein cmc1-like protein 1.14144e-38
Complete
biog2_v2.0_unigene1209 biogeco2 v2.0 1153
AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain ipr003441 0.0
Putative Complete
biog2_v2.0_unigene1384 biogeco2 v2.0 723
AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 8.99999e-40
Blast2go: nac domain ipr003441 0.0
Coding
biog2_v2.0_unigene2321 biogeco2 v2.0 1244
AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 8.99999e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain ipr003441 0.0
Putative C-terminus
biog2_v2.0_unigene3144 biogeco2 v2.0 534
AutoFact: cytochrome c oxidase biogenesis protein Cmc1-like protein [Arabidopsis thaliana] emb|CAC01805.1| hypothetical protein [Arabidopsis thaliana] dbj|BAC43639.1| unknown protein [Arabidopsis thaliana] gb|AAO42931.1| At5g16060 [Arabidopsis thaliana] gb|AED92242 3.0e-29
FL-Next: tr=Putative uncharacterized protein Sb01g040610; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: protein 1.61679e-39
Complete
biog2_v2.0_unigene4312 biogeco2 v2.0 864
AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 0.0
Blast2go: nac domain ipr003441 0.0
Coding
biog2_v2.0_unigene4746 biogeco2 v2.0 614
AutoFact: NAC domain-containing protein 78 [Arabidopsis thaliana] sp|Q84K00.2|NAC78_ARATH RecName: Full=NAC domain-containing protein 78; Short=ANAC078 emb|CAB85547.1| putative protein [Arabidopsis thaliana] gb|AAM20460.1| putative protein [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain ipr003441 0.0
C-terminus
biog2_v2.0_unigene5793 biogeco2 v2.0 692
AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain ipr003441 0.0
N-terminus
biog2_v2.0_unigene5913 biogeco2 v2.0 930
AutoFact: putative phosphopantothenoylcysteine decarboxylase [Arabidopsis thaliana] sp|P94063.2|HAL3B_ARATH RecName: Full=Probable phosphopantothenoylcysteine decarboxylase; AltName: Full=Halotolerance protein Hal3b; Short=AtHal3b gb|AAB53106.1| HAL3B protein [Arab 0.0
FL-Next: sp=Probable phosphopantothenoylcysteine decarboxylase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: phosphopantothenoylcysteine decarboxylase 0.0
Complete
biog2_v2.0_unigene6391 biogeco2 v2.0 1164
AutoFact: NAC protein n=2 Tax=Oryza sativa RepID=Q8H045_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain ipr003441 0.0
N-terminus
biog2_v2.0_unigene8671 biogeco2 v2.0 949
AutoFact: NAC protein n=2 Tax=Oryza sativa RepID=Q8H045_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain protein 0.0
Internal
biog2_v2.0_unigene9277 biogeco2 v2.0 429
AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain protein 0.0
Internal
biog2_v2.0_unigene12829 biogeco2 v2.0 335
AutoFact: NAC domain-containing protein 78 [Arabidopsis thaliana] sp|Q84K00.2|NAC78_ARATH RecName: Full=NAC domain-containing protein 78; Short=ANAC078 emb|CAB85547.1| putative protein [Arabidopsis thaliana] gb|AAM20460.1| putative protein [Arabidopsis thaliana] gb 0.0
Blast2go: nac domain ipr003441 0.0
unknown
biog2_v2.0_unigene14168 biogeco2 v2.0 355
AutoFact: NAC domain-containing protein 78 [Arabidopsis thaliana] sp|Q84K00.2|NAC78_ARATH RecName: Full=NAC domain-containing protein 78; Short=ANAC078 emb|CAB85547.1| putative protein [Arabidopsis thaliana] gb|AAM20460.1| putative protein [Arabidopsis thaliana] gb 0.0
Blast2go: nac domain ipr003441 0.0
Coding
biog2_v2.0_unigene14968 biogeco2 v2.0 352
AutoFact: NAM protein n=1 Tax=Petunia x hybrida RepID=Q40880_PETHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: no apical meristem-related protein 0.0
Putative C-terminus
biog2_v2.0_unigene16831 biogeco2 v2.0 447
AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 8.99999e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain ipr003441 0.0
Internal
biog2_v2.0_unigene17625 biogeco2 v2.0 427
AutoFact: NAC domain-containing protein 78 [Arabidopsis thaliana] sp|Q84K00.2|NAC78_ARATH RecName: Full=NAC domain-containing protein 78; Short=ANAC078 emb|CAB85547.1| putative protein [Arabidopsis thaliana] gb|AAM20460.1| putative protein [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain ipr003441 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain