|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog2_v2.0_unigene1725
|
biogeco2 v2.0
|
366
|
|
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
C-terminus
|
|
biog2_v2.0_unigene4091
|
biogeco2 v2.0
|
286
|
|
• AutoFact: 5'-3' exoribonuclease 2 n=2 Tax=Arabidopsis thaliana RepID=XRN2_ARATH
|
0.0
|
|
• FL-Next: sp=5'-3' exoribonuclease 4; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
N-terminus
|
|
biog2_v2.0_unigene8238
|
biogeco2 v2.0
|
534
|
|
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: 5 -3 exoribonuclease 3-like
|
0.0
|
|
C-terminus
|
|
biog2_v2.0_unigene10938
|
biogeco2 v2.0
|
364
|
|
• AutoFact: 5'-3' exoribonuclease 2 n=2 Tax=Arabidopsis thaliana RepID=XRN2_ARATH
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
N-terminus
|
|
biog2_v2.0_unigene11712
|
biogeco2 v2.0
|
97
|
|
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
unknown
|
|
biog2_v2.0_unigene12295
|
biogeco2 v2.0
|
415
|
|
• AutoFact: 5'-3' exoribonuclease 2 n=2 Tax=Arabidopsis thaliana RepID=XRN2_ARATH
|
0.0
|
|
• FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene12774
|
biogeco2 v2.0
|
313
|
|
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHL9_ARATH
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
0.0
|
|
Coding
|
|
biog2_v2.0_unigene13046
|
biogeco2 v2.0
|
380
|
|
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: sp=5'-3' exoribonuclease 3; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene13977
|
biogeco2 v2.0
|
388
|
|
• AutoFact: NXRV092_H05_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV092_H05 5' similar to Arabidopsis thaliana sequence At2g13930 putative retroelement pol polyprotein see http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence.
|
0.0
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: hypothetical protein VITISV_004415 [Vitis vinifera]
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene14502
|
biogeco2 v2.0
|
275
|
|
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL
|
0.0
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene15086
|
biogeco2 v2.0
|
366
|
|
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL
|
0.0
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene15161
|
biogeco2 v2.0
|
246
|
|
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QP36_ORYSJ
|
1.0e-28
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: reverse transcriptase
|
1.43514e-35
|
|
Internal
|
|
biog2_v2.0_unigene15718
|
biogeco2 v2.0
|
400
|
|
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene16509
|
biogeco2 v2.0
|
478
|
|
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA
|
0.0
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene19258
|
biogeco2 v2.0
|
308
|
|
• AutoFact: 5'-3' exoribonuclease 2 n=2 Tax=Arabidopsis thaliana RepID=XRN2_ARATH
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
C-terminus
|
|
biog2_v2.0_unigene19384
|
biogeco2 v2.0
|
245
|
|
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: 5 -3 exoribonuclease 3-like
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene19462
|
biogeco2 v2.0
|
490
|
|
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Internal
|
