Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco2 v2.0

Name: Exoribonuclease, phosphorolytic domain 2

Term: IPR015847  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene4151 biogeco2 v2.0 769
AutoFact: Exosome complex exonuclease rrp43, putative n=1 Tax=Ricinus communis RepID=B9T1F1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex component rrp43-like 0.0
C-terminus
biog2_v2.0_unigene8144 biogeco2 v2.0 736
AutoFact: 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] ref|NP_850537.1| 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] gb|AAG40370.1|AF325018_1 AT3g07750 [Arabidopsis thaliana] dbj|BAC43581.1| putative 3' exoribonuclease [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex exonuclease rrp42 0.0
Putative N-terminus
biog2_v2.0_unigene8177 biogeco2 v2.0 493
AutoFact: exosome complex component RRP41 [Arabidopsis thaliana] ref|NP_001118878.1| exosome complex component RRP41 [Arabidopsis thaliana] gb|AAF04590.1|AF191741_1 exonuclease RRP41 [Arabidopsis thaliana] emb|CAB71092.1| exonuclease RRP41 [Arabidopsis thaliana] db 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex component rrp41 0.0
Putative N-terminus
biog2_v2.0_unigene9353 biogeco2 v2.0 413
AutoFact: 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] ref|NP_850537.1| 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] gb|AAG40370.1|AF325018_1 AT3g07750 [Arabidopsis thaliana] dbj|BAC43581.1| putative 3' exoribonuclease [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein Sb08g006250; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: exosome complex exonuclease rrp42 0.0
C-terminus
biog2_v2.0_unigene15066 biogeco2 v2.0 475
AutoFact: Exosome complex exonuclease rrp43, putative n=1 Tax=Ricinus communis RepID=B9T1F1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex component rrp43-like 0.0
N-terminus
biog2_v2.0_unigene15117 biogeco2 v2.0 455
AutoFact: putative polyribonucleotide nucleotidyltransferase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: polyribonucleotide nucleotidyltransferase 0.0
Internal
biog2_v2.0_unigene19366 biogeco2 v2.0 195
AutoFact: exosome complex component RRP41 [Arabidopsis thaliana] ref|NP_001118878.1| exosome complex component RRP41 [Arabidopsis thaliana] gb|AAF04590.1|AF191741_1 exonuclease RRP41 [Arabidopsis thaliana] emb|CAB71092.1| exonuclease RRP41 [Arabidopsis thaliana] db 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex component rrp41 0.0
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain