Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Exoribonuclease, phosphorolytic domain 1

Term: IPR001247  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene4151 biogeco2 v2.0 769
AutoFact: Exosome complex exonuclease rrp43, putative n=1 Tax=Ricinus communis RepID=B9T1F1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex component rrp43-like 0.0
C-terminus
biog2_v2.0_unigene8144 biogeco2 v2.0 736
AutoFact: 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] ref|NP_850537.1| 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] gb|AAG40370.1|AF325018_1 AT3g07750 [Arabidopsis thaliana] dbj|BAC43581.1| putative 3' exoribonuclease [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex exonuclease rrp42 0.0
Putative N-terminus
biog2_v2.0_unigene8177 biogeco2 v2.0 493
AutoFact: exosome complex component RRP41 [Arabidopsis thaliana] ref|NP_001118878.1| exosome complex component RRP41 [Arabidopsis thaliana] gb|AAF04590.1|AF191741_1 exonuclease RRP41 [Arabidopsis thaliana] emb|CAB71092.1| exonuclease RRP41 [Arabidopsis thaliana] db 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex component rrp41 0.0
Putative N-terminus
biog2_v2.0_unigene9353 biogeco2 v2.0 413
AutoFact: 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] ref|NP_850537.1| 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] gb|AAG40370.1|AF325018_1 AT3g07750 [Arabidopsis thaliana] dbj|BAC43581.1| putative 3' exoribonuclease [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein Sb08g006250; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: exosome complex exonuclease rrp42 0.0
C-terminus
biog2_v2.0_unigene12431 biogeco2 v2.0 305
AutoFact: putative exoribonuclease [Oryza sativa Japonica Group] gb|ABF99850.1| 3' exoribonuclease family, domain 1 containing protein, expressed [Oryza sativa Japonica Group] gb|EAZ29273.1| hypothetical protein OsJ_13338 [Oryza sativa Japonica Group] dbj|BAH00946. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex component mtr3-like 0.0
Putative N-terminus
biog2_v2.0_unigene13402 biogeco2 v2.0 636
AutoFact: magnesium chelatase subunit [Glycine max] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: magnesium chelatase h subunit 0.0
Internal
biog2_v2.0_unigene13559 biogeco2 v2.0 410
AutoFact: Peptidase S8 and S53, subtilisin, kexin, sedolisin; 3 exoribonuclease [Medicago truncatula] 0.0
Blast2go: exosome complex component rrp46 0.0
unknown
biog2_v2.0_unigene14850 biogeco2 v2.0 213
AutoFact: putative exoribonuclease [Oryza sativa Japonica Group] gb|ABF99850.1| 3' exoribonuclease family, domain 1 containing protein, expressed [Oryza sativa Japonica Group] gb|EAZ29273.1| hypothetical protein OsJ_13338 [Oryza sativa Japonica Group] dbj|BAH00946. 0.0
Blast2go: exosome complex component mtr3-like 0.0
unknown
biog2_v2.0_unigene15066 biogeco2 v2.0 475
AutoFact: Exosome complex exonuclease rrp43, putative n=1 Tax=Ricinus communis RepID=B9T1F1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex component rrp43-like 0.0
N-terminus
biog2_v2.0_unigene15117 biogeco2 v2.0 455
AutoFact: putative polyribonucleotide nucleotidyltransferase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: polyribonucleotide nucleotidyltransferase 0.0
Internal
biog2_v2.0_unigene15311 biogeco2 v2.0 528
AutoFact: magnesium chelatase subunit [Glycine max] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: magnesium chelatase h subunit 0.0
Internal
biog2_v2.0_unigene17194 biogeco2 v2.0 221
AutoFact: putative exoribonuclease [Oryza sativa Japonica Group] gb|ABF99850.1| 3' exoribonuclease family, domain 1 containing protein, expressed [Oryza sativa Japonica Group] gb|EAZ29273.1| hypothetical protein OsJ_13338 [Oryza sativa Japonica Group] dbj|BAH00946. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex component mtr3-like 0.0
Internal
biog2_v2.0_unigene19366 biogeco2 v2.0 195
AutoFact: exosome complex component RRP41 [Arabidopsis thaliana] ref|NP_001118878.1| exosome complex component RRP41 [Arabidopsis thaliana] gb|AAF04590.1|AF191741_1 exonuclease RRP41 [Arabidopsis thaliana] emb|CAB71092.1| exonuclease RRP41 [Arabidopsis thaliana] db 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex component rrp41 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain