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Assembly Name: biogeco2 v2.0

Name: Transcription factor, SBP-box

Term: IPR004333  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene314 biogeco2 v2.0 560
AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RZZ7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: squamosa promoter-binding-like protein 1-like 0.0
Internal
biog2_v2.0_unigene1227 biogeco2 v2.0 740
AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RSX0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: squamosa promoter-binding-like protein 7 0.0
Internal
biog2_v2.0_unigene1558 biogeco2 v2.0 699
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9TAE9_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog2_v2.0_unigene2536 biogeco2 v2.0 1015
AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RZZ7_RICCO 0.0
FL-Next: sp=Squamosa promoter-binding-like protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: squamosa promoter-binding-like protein 1-like 0.0
C-terminus
biog2_v2.0_unigene2929 biogeco2 v2.0 711
AutoFact: RecName: Full=Squamosa promoter-binding-like protein 7 emb|CAH67152.1| OSIGBa0122F23.9 [Oryza sativa Indica Group] 4.0e-37
Blast2go: squamosa promoter-binding-like protein 7-like 0.0
unknown
biog2_v2.0_unigene4608 biogeco2 v2.0 889
AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RSX0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: squamosa promoter-binding-like protein 7 0.0
C-terminus
biog2_v2.0_unigene4800 biogeco2 v2.0 877
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9SU35_PHYPA 0.0
Blast2go: protein 0.0
Putative coding
biog2_v2.0_unigene5003 biogeco2 v2.0 1111
AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9R8V3_RICCO 0.0
FL-Next: sp=Squamosa promoter-binding-like protein 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: squamosa promoter-binding-like protein 14-like 0.0
C-terminus
biog2_v2.0_unigene6179 biogeco2 v2.0 662
AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RVW3_RICCO 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: squamosa promoter-binding 0.0
C-terminus
biog2_v2.0_unigene7018 biogeco2 v2.0 697
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9TKM8_PHYPA 0.0
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene8505 biogeco2 v2.0 504
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9SU35_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
biog2_v2.0_unigene9447 biogeco2 v2.0 295
AutoFact: SBP-domain protein 6 [Physcomitrella patens] 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 6.4192e-29
Internal
biog2_v2.0_unigene10355 biogeco2 v2.0 326
AutoFact: SBP-domain protein 6 [Physcomitrella patens] 8.0e-25
Blast2go: protein 6.4192e-29
unknown
biog2_v2.0_unigene10986 biogeco2 v2.0 213
AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RVW3_RICCO 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: squamosa promoter-binding 0.0
N-terminus
biog2_v2.0_unigene11223 biogeco2 v2.0 284
AutoFact: RecName: Full=Squamosa promoter-binding-like protein 7 emb|CAH67152.1| OSIGBa0122F23.9 [Oryza sativa Indica Group] 4.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: squamosa promoter-binding-like protein 7-like 0.0
Internal
biog2_v2.0_unigene14785 biogeco2 v2.0 297
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9SU35_PHYPA 0.0
Blast2go: protein 0.0
Coding
biog2_v2.0_unigene14897 biogeco2 v2.0 204
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9SU35_PHYPA 0.0
Blast2go: protein 0.0
Putative coding
biog2_v2.0_unigene15054 biogeco2 v2.0 498
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9TAE9_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
biog2_v2.0_unigene16122 biogeco2 v2.0 263
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9TKM8_PHYPA 0.0
Blast2go: protein 0.0
Putative coding
biog2_v2.0_unigene16641 biogeco2 v2.0 288
AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S5U2_PHYPA 2.0e-12
Blast2go: protein 1.2698e-12
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain