Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Ribonuclease CAF1

Term: IPR006941  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene2018 biogeco2 v2.0 361
AutoFact: putative CCR4-associated factor 1-7 [Arabidopsis thaliana] sp|Q9SKZ2.2|CAF1G_ARATH RecName: Full=Probable CCR4-associated factor 1 homolog 7 gb|AAK93623.1| putative CCR4-associated factor [Arabidopsis thaliana] gb|AAD15397.2| putative CCR4-associated fact 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccr4-associated factor 0.0
N-terminus
biog2_v2.0_unigene2157 biogeco2 v2.0 633
AutoFact: putative CCR4-associated factor 1-7 [Arabidopsis thaliana] sp|Q9SKZ2.2|CAF1G_ARATH RecName: Full=Probable CCR4-associated factor 1 homolog 7 gb|AAK93623.1| putative CCR4-associated factor [Arabidopsis thaliana] gb|AAD15397.2| putative CCR4-associated fact 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable ccr4-associated factor 1 homolog 7-like 0.0
C-terminus
biog2_v2.0_unigene2831 biogeco2 v2.0 530
AutoFact: reticulon-like protein B8 [Arabidopsis thaliana] ref|NP_850551.1| reticulon-like protein B8 [Arabidopsis thaliana] sp|Q9SS37.1|RTNLH_ARATH RecName: Full=Reticulon-like protein B8; Short=AtRTNLB8 gb|AAF02816.1|AC009400_12 unknown protein [Arabidopsis thali 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reticulon-like protein b8 0.0
C-terminus
biog2_v2.0_unigene3005 biogeco2 v2.0 731
AutoFact: putative CCR4-associated factor 1-7 [Arabidopsis thaliana] sp|Q9SKZ2.2|CAF1G_ARATH RecName: Full=Probable CCR4-associated factor 1 homolog 7 gb|AAK93623.1| putative CCR4-associated factor [Arabidopsis thaliana] gb|AAD15397.2| putative CCR4-associated fact 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccr4-associated factor 0.0
C-terminus
biog2_v2.0_unigene4875 biogeco2 v2.0 1475
AutoFact: putative CCR4-associated factor 1-7 [Arabidopsis thaliana] sp|Q9SKZ2.2|CAF1G_ARATH RecName: Full=Probable CCR4-associated factor 1 homolog 7 gb|AAK93623.1| putative CCR4-associated factor [Arabidopsis thaliana] gb|AAD15397.2| putative CCR4-associated fact 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribonuclease caf1 0.0
Complete
biog2_v2.0_unigene5026 biogeco2 v2.0 817
AutoFact: Tryptophan biosynthesis protein, trpc, putative n=1 Tax=Ricinus communis RepID=B9T1U0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: indole-3-glycerol phosphate synthase 0.0
C-terminus
biog2_v2.0_unigene9462 biogeco2 v2.0 408
AutoFact: putative CCR4-associated factor 1-7 [Arabidopsis thaliana] sp|Q9SKZ2.2|CAF1G_ARATH RecName: Full=Probable CCR4-associated factor 1 homolog 7 gb|AAK93623.1| putative CCR4-associated factor [Arabidopsis thaliana] gb|AAD15397.2| putative CCR4-associated fact 0.0
Blast2go: probable ccr4-associated factor 1 homolog 7-like 0.0
unknown
biog2_v2.0_unigene9834 biogeco2 v2.0 368
AutoFact: reticulon-like protein B8 [Arabidopsis thaliana] ref|NP_850551.1| reticulon-like protein B8 [Arabidopsis thaliana] sp|Q9SS37.1|RTNLH_ARATH RecName: Full=Reticulon-like protein B8; Short=AtRTNLB8 gb|AAF02816.1|AC009400_12 unknown protein [Arabidopsis thali 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reticulon-like protein b8 0.0
Internal
biog2_v2.0_unigene11593 biogeco2 v2.0 113
AutoFact: putative CCR4-associated factor 1-7 [Arabidopsis thaliana] sp|Q9SKZ2.2|CAF1G_ARATH RecName: Full=Probable CCR4-associated factor 1 homolog 7 gb|AAK93623.1| putative CCR4-associated factor [Arabidopsis thaliana] gb|AAD15397.2| putative CCR4-associated fact 0.0
Blast2go: probable ccr4-associated factor 1 homolog 7-like 0.0
unknown
biog2_v2.0_unigene18124 biogeco2 v2.0 406
AutoFact: polyA specific ribonuclease [Arabidopsis thaliana] 0.0
FL-Next: Isoform 3 of Poly(A)-specific ribonuclease PARN OS=Arabidopsis thaliana GN=PARN 0.0
Blast2go: poly -specific ribonuclease parn-like 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain