Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Extensin repeat

Term: IPR006706  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene1823 biogeco2 v2.0 584
AutoFact: Putative p23 co-chaperone n=1 Tax=Cryptomeria japonica RepID=Q1XG56_CRYJA 3.00018e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein _027940-like 0.0
N-terminus
biog2_v2.0_unigene4940 biogeco2 v2.0 828
AutoFact: Pollen Ole e 1 allergen and extensin [Medicago truncatula] 1.0e-24
FL-Next: sp=Anther-specific protein LAT52; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: pollen ole e 1 allergen and extensin family protein 1.09897e-31
Complete
biog2_v2.0_unigene5148 biogeco2 v2.0 1136
AutoFact: DNA-directed RNA polymerase n=3 Tax=Magnoliophyta RepID=B9FZ51_ORYSJ 3.9937e-43
Blast2go: dna-directed rna polymerase 0.0
Coding
biog2_v2.0_unigene5961 biogeco2 v2.0 1985
AutoFact: flocculin [Trichomonas vaginalis G3] gb|EAX95321.1| flocculin, putative [Trichomonas vaginalis G3] 1.0e-13
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
biog2_v2.0_unigene7363 biogeco2 v2.0 421
AutoFact: Putative p23 co-chaperone n=1 Tax=Cryptomeria japonica RepID=Q1XG56_CRYJA 3.00018e-42
Blast2go: uncharacterized protein _027940-like 0.0
Coding
biog2_v2.0_unigene10058 biogeco2 v2.0 254
AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 0.0
FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable splicing factor 3a subunit 1-like 0.0
Internal
biog2_v2.0_unigene11628 biogeco2 v2.0 272
AutoFact: Pollen Ole e 1 allergen and extensin [Medicago truncatula] 1.0e-24
Blast2go: pollen ole e 1 allergen and extensin family protein 1.09897e-31
Coding
biog2_v2.0_unigene13570 biogeco2 v2.0 382
AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 0.0
FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable splicing factor 3a subunit 1-like 0.0
Internal
biog2_v2.0_unigene13683 biogeco2 v2.0 361
AutoFact: Pollen Ole e 1 allergen and extensin [Medicago truncatula] 1.0e-24
Blast2go: pollen ole e 1 allergen and extensin family protein 1.09897e-31
Coding
biog2_v2.0_unigene19495 biogeco2 v2.0 397
AutoFact: flocculin [Trichomonas vaginalis G3] gb|EAX95321.1| flocculin, putative [Trichomonas vaginalis G3] 1.0e-13
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain