Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco2 v2.0

Name: ROK

Term: IPR000600  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene4940 biogeco2 v2.0 828
AutoFact: Pollen Ole e 1 allergen and extensin [Medicago truncatula] 1.0e-24
FL-Next: sp=Anther-specific protein LAT52; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: pollen ole e 1 allergen and extensin family protein 1.09897e-31
Complete
biog2_v2.0_unigene5144 biogeco2 v2.0 816
AutoFact: proline-rich protein [Solanum tuberosum] 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: extensin-like protein 1.42814e-17
N-terminus
biog2_v2.0_unigene5165 biogeco2 v2.0 328
AutoFact: Gly_rich multi-domain protein 4.0e-17
Coding
biog2_v2.0_unigene10058 biogeco2 v2.0 254
AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 0.0
FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable splicing factor 3a subunit 1-like 0.0
Internal
biog2_v2.0_unigene11628 biogeco2 v2.0 272
AutoFact: Pollen Ole e 1 allergen and extensin [Medicago truncatula] 1.0e-24
Blast2go: pollen ole e 1 allergen and extensin family protein 1.09897e-31
Coding
biog2_v2.0_unigene13130 biogeco2 v2.0 119
AutoFact: proline-rich protein [Solanum tuberosum] 2.0e-10
Blast2go: extensin-like protein 1.42814e-17
unknown
biog2_v2.0_unigene13570 biogeco2 v2.0 382
AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 0.0
FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable splicing factor 3a subunit 1-like 0.0
Internal
biog2_v2.0_unigene13683 biogeco2 v2.0 361
AutoFact: Pollen Ole e 1 allergen and extensin [Medicago truncatula] 1.0e-24
Blast2go: pollen ole e 1 allergen and extensin family protein 1.09897e-31
Coding

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain