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Assembly Name: biogeco2 v2.0

Name: Alpha tubulin

Term: IPR002452  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene689 biogeco2 v2.0 497
AutoFact: major facilitator protein [Arabidopsis thaliana] gb|AAL31925.1|AF419593_1 At2g39210/T16B24.15 [Arabidopsis thaliana] gb|AAC28987.1| nodulin-like protein [Arabidopsis thaliana] gb|AEC09646.1| major facilitator protein [Arabidopsis thaliana] 0.0
Blast2go: major facilitator protein 0.0
Putative coding
biog2_v2.0_unigene3626 biogeco2 v2.0 330
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SPT4_RICCO 0.0
FL-Next: tr=RNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: swap surp domain-containing protein 0.0
C-terminus
biog2_v2.0_unigene5184 biogeco2 v2.0 1730
AutoFact: Tubulin alpha-2/alpha-4 chain n=384 Tax=Eukaryota RepID=TBA2_ARATH 0.0
FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
Blast2go: alpha tubulin 1 0.0
Complete
biog2_v2.0_unigene16968 biogeco2 v2.0 429
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SPT4_RICCO 0.0
FL-Next: tr=At4g31200; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swap surp domain-containing protein 0.0
Internal
biog2_v2.0_unigene18955 biogeco2 v2.0 511
AutoFact: PREDICTED: similar to phosphatidylserine decarboxylase n=1 Tax=Vitis vinifera RepID=UPI0001984625 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: phosphatidylserine decarboxylase 0.0
C-terminus
biog2_v2.0_unigene19593 biogeco2 v2.0 414
AutoFact: PREDICTED: tubulin alpha-1C chain-like n=1 Tax=Sus scrofa RepID=UPI0001E87237 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha tubulin 0.0
N-terminus
biog2_v2.0_unigene19743 biogeco2 v2.0 461
AutoFact: Tubulin alpha-2/alpha-4 chain n=384 Tax=Eukaryota RepID=TBA2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha tubulin 1 0.0
Internal
biog2_v2.0_unigene19766 biogeco2 v2.0 446
AutoFact: Alpha-tubulin-like protein n=1 Tax=Solanum tuberosum RepID=Q3HRW7_SOLTU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-tubulin-like protein 0.0
Putative N-terminus
biog2_v2.0_unigene19822 biogeco2 v2.0 501
AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-3C/D chain-like n=1 Tax=Pongo abelii RepID=UPI0001D601A7 0.0
FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
Blast2go: alpha-tubulin 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain