Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Zinc finger, CW-type

Term: IPR011124  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene1714 biogeco2 v2.0 1111
AutoFact: methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_974850.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_001190421.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] sp|Q8LA53.1|MBD2_ARATH RecName: Full=M 0.0
FL-Next: sp=Methyl-CpG-binding domain-containing protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: methyl-cpg-binding domain protein 02 0.0
C-terminus
biog2_v2.0_unigene1755 biogeco2 v2.0 476
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SRS4_RICCO 2.0e-11
Blast2go: b3 domain-containing protein 8.94514e-12
unknown
biog2_v2.0_unigene3665 biogeco2 v2.0 341
AutoFact: Unassigned protein
FL-Next: tr=CW-type zinc finger protein; Phaseolus vulgaris (Kidney bean) (French bean). 0.0
Blast2go: morc family cw-type zinc finger protein 0.0
Internal
biog2_v2.0_unigene9602 biogeco2 v2.0 413
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AEC06861.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] 9.0e-36
Blast2go: protein 0.0
Putative coding
biog2_v2.0_unigene9734 biogeco2 v2.0 593
AutoFact: methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_974850.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_001190421.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] sp|Q8LA53.1|MBD2_ARATH RecName: Full=M 0.0
Blast2go: methyl-cpg-binding domain protein 02 0.0
Coding
biog2_v2.0_unigene10275 biogeco2 v2.0 392
AutoFact: Huntingtin interacting protein, putative n=1 Tax=Ricinus communis RepID=B9S2T8_RICCO 1.0e-28
Blast2go: histone-lysine n-methyltransferase ashh2-like 1.01747e-33
Putative coding
biog2_v2.0_unigene11614 biogeco2 v2.0 194
AutoFact: PREDICTED: MORC family CW-type zinc finger 3 isoform 1 [Bos taurus] ref|XP_002685198.1| PREDICTED: MORC family CW-type zinc finger 3 [Bos taurus] gb|DAA32968.1| MORC family CW-type zinc finger 3 [Bos taurus] 5.60519e-45
FL-Next: tr=Os06g0622000 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: morc family cw-type zinc finger protein 3 0.0
Internal
biog2_v2.0_unigene14336 biogeco2 v2.0 412
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AEC06861.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] 9.0e-36
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene16180 biogeco2 v2.0 448
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AEC06861.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] 9.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene16395 biogeco2 v2.0 537
AutoFact: CW-type zinc-finger protein [Arabidopsis thaliana] dbj|BAC42503.1| unknown protein [Arabidopsis thaliana] gb|AAP21295.1| At4g15730 [Arabidopsis thaliana] gb|AEE83641.1| CW-type zinc-finger protein [Arabidopsis thaliana] 2.0e-17
Blast2go: uncharacterized protein 6.10097e-27
unknown
biog2_v2.0_unigene16691 biogeco2 v2.0 339
AutoFact: methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_974850.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_001190421.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] sp|Q8LA53.1|MBD2_ARATH RecName: Full=M 0.0
FL-Next: sp=Methyl-CpG-binding domain-containing protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: methyl-cpg-binding domain protein 02 0.0
Internal
biog2_v2.0_unigene17175 biogeco2 v2.0 317
AutoFact: PREDICTED: MORC family CW-type zinc finger 3 isoform 1 [Bos taurus] ref|XP_002685198.1| PREDICTED: MORC family CW-type zinc finger 3 [Bos taurus] gb|DAA32968.1| MORC family CW-type zinc finger 3 [Bos taurus] 5.60519e-45
Blast2go: morc family cw-type zinc finger protein 3 0.0
Coding
biog2_v2.0_unigene17544 biogeco2 v2.0 261
AutoFact: PREDICTED: MORC family CW-type zinc finger 3 isoform 1 [Bos taurus] ref|XP_002685198.1| PREDICTED: MORC family CW-type zinc finger 3 [Bos taurus] gb|DAA32968.1| MORC family CW-type zinc finger 3 [Bos taurus] 5.60519e-45
Blast2go: morc family cw-type zinc finger protein 3 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain