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Assembly Name: biogeco2 v2.0

Name: C-type lectin, conserved site

Term: IPR018378  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog2_v2.0_unigene2489 biogeco2 v2.0 1581
• AutoFact: protein dehydration-INDUCED 19-4 [Arabidopsis thaliana] sp|Q8VXU6.1|DI194_ARATH RecName: Full=Protein DEHYDRATION-INDUCED 19 homolog 4; Short=AtDi19-4 gb|AAL67123.1| AT3g06760/F3E22_10 [Arabidopsis thaliana] gb|AAM91471.1| AT3g06760/F3E22_10 [Arabidopsis 4.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein dehydration-induced 19-like 0.0
Complete
biog2_v2.0_unigene3187 biogeco2 v2.0 724
• AutoFact: E3 ubiquitin-protein ligase [Arabidopsis thaliana] sp|Q93Z92.1|RING4_ARATH RecName: Full=E3 ubiquitin-protein ligase At4g11680; AltName: Full=RING finger protein At4g11680 gb|AAL15343.1| AT4g11680/T5C23_110 [Arabidopsis thaliana] gb|AAR23720.1| At4g11680/ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
biog2_v2.0_unigene3294 biogeco2 v2.0 392
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9S4Y7_RICCO 0.0
• Blast2go: zinc finger 0.0
Putative coding
biog2_v2.0_unigene6073 biogeco2 v2.0 1419
• AutoFact: fiber protein Fb2 [Gossypium barbadense] 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
biog2_v2.0_unigene8417 biogeco2 v2.0 554
• AutoFact: RING-H2 finger protein RHG1a-like n=1 Tax=Oryza sativa Japonica Group RepID=Q5N7R4_ORYSJ 0.0
• Blast2go: protein binding protein 0.0
Putative coding
biog2_v2.0_unigene8709 biogeco2 v2.0 972
• AutoFact: DUF2054 domain containing protein 5.60519e-45
• FL-Next: tr=Putative uncharacterized protein; subsp. trichocarpa). 0.0
• Blast2go: uncharacterized protein 0.0
Complete
biog2_v2.0_unigene9306 biogeco2 v2.0 809
• AutoFact: RING-H2 finger protein RHG1a-like n=1 Tax=Oryza sativa Japonica Group RepID=Q5N7R4_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding protein 0.0
C-terminus
biog2_v2.0_unigene9443 biogeco2 v2.0 548
• AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AA47_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: trna pseudouridine synthase a-like 0.0
Putative Complete
biog2_v2.0_unigene10782 biogeco2 v2.0 658
• AutoFact: DHHC-type zinc finger family protein [Arabidopsis thaliana] sp|Q8L5Y5.1|ZDH17_ARATH RecName: Full=Probable S-acyltransferase At4g15080; AltName: Full=Probable palmitoyltransferase At4g15080; AltName: Full=Zinc finger DHHC domain-containing protein At4g150 2.0e-07
• FL-Next: sp=Probable S-acyltransferase At4g15080; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: probable s-acyltransferase at4g15080-like 4.62259e-09
N-terminus
biog2_v2.0_unigene11336 biogeco2 v2.0 269
• AutoFact: HECT; Ubiquitin [Medicago truncatula] 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase UPL5; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: e3 ubiquitin-protein ligase upl5 0.0
Internal
biog2_v2.0_unigene13113 biogeco2 v2.0 669
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9S4Y7_RICCO 0.0
• FL-Next: sp=Probable S-acyltransferase At4g15080; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: zinc finger 0.0
Internal
biog2_v2.0_unigene13173 biogeco2 v2.0 284
• AutoFact: HECT; Ubiquitin [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase upl5 0.0
Putative N-terminus
biog2_v2.0_unigene13563 biogeco2 v2.0 517
• AutoFact: Os01g0104000 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q658C8_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
biog2_v2.0_unigene13750 biogeco2 v2.0 282
• AutoFact: vacuolar protein sorting 13C protein-like [Oryza sativa Japonica Group] dbj|BAD19586.1| vacuolar protein sorting 13C protein-like [Oryza sativa Japonica Group] 8.0e-33
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: pleckstrin homology domain-containing protein 0.0
C-terminus
biog2_v2.0_unigene15346 biogeco2 v2.0 407
• AutoFact: ring zinc finger protein-like protein [Oryza sativa Japonica Group] 0.0
• Blast2go: cleavage and polyadenylation specificity 0.0
unknown
biog2_v2.0_unigene15768 biogeco2 v2.0 267
• AutoFact: RING-H2 finger protein RHG1a-like n=1 Tax=Oryza sativa Japonica Group RepID=Q5N7R4_ORYSJ 0.0
• Blast2go: protein binding protein 0.0
unknown
biog2_v2.0_unigene16011 biogeco2 v2.0 129
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9S4Y7_RICCO 0.0
• Blast2go: zinc finger family protein 0.0
unknown
biog2_v2.0_unigene16335 biogeco2 v2.0 232
• AutoFact: barley mlo defense gene homolog2 [Zea mays] gb|AAK38338.1| seven transmembrane protein Mlo2 [Zea mays] gb|ACN28009.1| unknown [Zea mays] 0.0
• Blast2go: protein 0.0
unknown
biog2_v2.0_unigene16725 biogeco2 v2.0 558
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9R8R6_RICCO 0.0
• FL-Next: sp=Probable S-acyltransferase At4g15080; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: zinc finger 0.0
Internal
biog2_v2.0_unigene16859 biogeco2 v2.0 355
• AutoFact: Vacuolar protein sorting-associated protein, putative n=1 Tax=Ricinus communis RepID=B9RZX0_RICCO 1.4013e-45
• FL-Next: tr=F21D18.20; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pleckstrin homology domain-containing protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain