Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Rab-GTPase-TBC domain

Term: IPR000195  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene1899 biogeco2 v2.0 179
AutoFact: TBC1 domain family member 15 [Pongo abelii] emb|CAH89546.1| hypothetical protein [Pongo abelii] 0.0
Blast2go: tbc domain-containing protein 0.0
unknown
biog2_v2.0_unigene3961 biogeco2 v2.0 573
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] dbj|BAD44199.1| GTPase activator protein of Rab-like small GTPases-like protein [Arabidopsis thaliana] gb|AED94745.1| RabGAP/TBC domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtpase-activating protein gyp7-like 0.0
C-terminus
biog2_v2.0_unigene4288 biogeco2 v2.0 666
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] gb|AAK43888.1|AF370511_1 Unknown protein [Arabidopsis thaliana] gb|AAC02742.2| expressed protein [Arabidopsis thaliana] gb|AAM91215.1| unknown protein [Arabidopsis thaliana] gb|AEC08431.1| RabGAP 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tbc1 domain family member 22a 0.0
N-terminus
biog2_v2.0_unigene7116 biogeco2 v2.0 585
AutoFact: putative GTPase activator protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene8158 biogeco2 v2.0 431
AutoFact: TBC1 domain family member 15 [Pongo abelii] emb|CAH89546.1| hypothetical protein [Pongo abelii] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: tbc domain-containing protein 0.0
Internal
biog2_v2.0_unigene8310 biogeco2 v2.0 478
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] emb|CAB36837.1| putative protein [Arabidopsis thaliana] emb|CAB78415.1| putative protein [Arabidopsis thaliana] gb|AEE83318.1| RabGAP/TBC domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene9056 biogeco2 v2.0 399
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] gb|AAK43888.1|AF370511_1 Unknown protein [Arabidopsis thaliana] gb|AAC02742.2| expressed protein [Arabidopsis thaliana] gb|AAM91215.1| unknown protein [Arabidopsis thaliana] gb|AEC08431.1| RabGAP 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: tbc1 domain family member 22a 0.0
Putative N-terminus
biog2_v2.0_unigene10168 biogeco2 v2.0 375
AutoFact: Putative copper-transporting ATPase 3 n=13 Tax=Camelineae RepID=AHM7_ARATH 0.0
Blast2go: heavy metal p-type atpase 0.0
unknown
biog2_v2.0_unigene10363 biogeco2 v2.0 203
AutoFact: TBC1 domain family member 15 [Pongo abelii] emb|CAH89546.1| hypothetical protein [Pongo abelii] 0.0
FL-Next: tr=Putative uncharacterized protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: tbc domain-containing protein 0.0
Internal
biog2_v2.0_unigene10474 biogeco2 v2.0 368
AutoFact: TBC1 domain family member 15 [Pongo abelii] emb|CAH89546.1| hypothetical protein [Pongo abelii] 0.0
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: tbc domain-containing protein 0.0
Putative C-terminus
biog2_v2.0_unigene11619 biogeco2 v2.0 410
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] emb|CAB36837.1| putative protein [Arabidopsis thaliana] emb|CAB78415.1| putative protein [Arabidopsis thaliana] gb|AEE83318.1| RabGAP/TBC domain-containing protein [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene11794 biogeco2 v2.0 390
AutoFact: RabGAP/TBC domain-containing protein-like [Oryza sativa Japonica Group] 0.0
Blast2go: run and tbc1 domain containing 0.0
unknown
biog2_v2.0_unigene11982 biogeco2 v2.0 323
AutoFact: putative GTPase activator protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tbc domain-containing protein 0.0
Internal
biog2_v2.0_unigene12153 biogeco2 v2.0 220
AutoFact: putative GTPase activator protein [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
Coding
biog2_v2.0_unigene12800 biogeco2 v2.0 286
AutoFact: RabGAP/TBC domain-containing protein-like n=2 Tax=Oryza sativa RepID=Q5QMF8_ORYSJ 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tbc domain-containing protein 2.60415e-39
Putative C-terminus
biog2_v2.0_unigene13004 biogeco2 v2.0 334
AutoFact: Ric1 rop-interactive CRIB motif-containing protein RIC1 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S3U2_PHYPA 0.0
Blast2go: ric1 rop-interactive crib motif-containing protein ric1 0.0
unknown
biog2_v2.0_unigene15881 biogeco2 v2.0 437
AutoFact: Copper-transporting atpase paa1, putative n=1 Tax=Ricinus communis RepID=B9RQX4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: p-type atpase 0.0
Internal
biog2_v2.0_unigene16002 biogeco2 v2.0 197
AutoFact: putative GTPase activator protein [Arabidopsis thaliana] 0.0
Blast2go: tbc domain-containing protein 0.0
unknown
biog2_v2.0_unigene17570 biogeco2 v2.0 277
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] emb|CAB36837.1| putative protein [Arabidopsis thaliana] emb|CAB78415.1| putative protein [Arabidopsis thaliana] gb|AEE83318.1| RabGAP/TBC domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene18227 biogeco2 v2.0 371
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] emb|CAB36837.1| putative protein [Arabidopsis thaliana] emb|CAB78415.1| putative protein [Arabidopsis thaliana] gb|AEE83318.1| RabGAP/TBC domain-containing protein [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain