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Assembly Name: biogeco2 v2.0

Name: DNA-directed DNA polymerase, family B, conserved site

Term: IPR017964  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene914 biogeco2 v2.0 554
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9SC90_RICCO 0.0
FL-Next: sp=DNA polymerase alpha catalytic subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna polymerase alpha catalytic 0.0
Putative C-terminus
biog2_v2.0_unigene1799 biogeco2 v2.0 360
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9SC90_RICCO 0.0
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna polymerase alpha catalytic 0.0
Internal
biog2_v2.0_unigene7299 biogeco2 v2.0 494
AutoFact: ATP-dependent clp protease ATP-binding subunit clpx, putative n=1 Tax=Ricinus communis RepID=B9S1U1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: atp-dependent clp protease atp-binding subunit -like 0.0
C-terminus
biog2_v2.0_unigene7776 biogeco2 v2.0 659
AutoFact: Protein phosphatase 2c, putative n=1 Tax=Ricinus communis RepID=B9RL74_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 0.0
C-terminus
biog2_v2.0_unigene8384 biogeco2 v2.0 463
AutoFact: DNA polymerase delta catalytic subunit n=6 Tax=Poaceae RepID=DPOD1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna polymerase delta subunit 1 0.0
C-terminus
biog2_v2.0_unigene9128 biogeco2 v2.0 561
AutoFact: Protein phosphatase 2c, putative n=1 Tax=Ricinus communis RepID=B9RL74_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 0.0
Putative N-terminus
biog2_v2.0_unigene12488 biogeco2 v2.0 417
AutoFact: Nucleotid_trans domain containing protein 9.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein at4g15970-like 0.0
N-terminus
biog2_v2.0_unigene14586 biogeco2 v2.0 344
AutoFact: Nucleotid_trans domain containing protein 2.0e-05
Blast2go: uncharacterized protein at4g15970-like 1.24167e-27
unknown
biog2_v2.0_unigene15902 biogeco2 v2.0 321
AutoFact: DNA polymerase delta catalytic subunit n=6 Tax=Poaceae RepID=DPOD1_ORYSJ 0.0
FL-Next: sp=DNA polymerase delta catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna polymerase delta subunit 1 0.0
Internal
biog2_v2.0_unigene15906 biogeco2 v2.0 450
AutoFact: Protein phosphatase 2c, putative n=1 Tax=Ricinus communis RepID=B9RL74_RICCO 0.0
Blast2go: protein phosphatase 0.0
unknown
biog2_v2.0_unigene15915 biogeco2 v2.0 545
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9RF68_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna polymerase zeta catalytic 0.0
Putative C-terminus
biog2_v2.0_unigene16995 biogeco2 v2.0 270
AutoFact: putative protein phosphatase 2C 9 [Arabidopsis thaliana] sp|Q9LME4.1|P2C09_ARATH RecName: Full=Probable protein phosphatase 2C 9; Short=AtPP2C09; AltName: Full=Phytochrome-associated protein phosphatase 2C; Short=PAPP2C gb|AAF87263.1|AC068562_10 Strong si 0.0
Blast2go: protein phosphatase 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain