Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco2 v2.0

Name: TNFR/CD27/30/40/95 cysteine-rich region

Term: IPR001368  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene675 biogeco2 v2.0 1259
AutoFact: calmodulin-binding receptor-like cytoplasmic kinase 2 [Arabidopsis thaliana] sp|Q8VZJ9.1|Y4330_ARATH RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At4g00330 gb|AAL36420.1| unknown protein [Arabidopsis thaliana] gb|AAM91688.1| unk 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable leucine-rich repeat receptor-like protein kinase at4g00330-like 0.0
N-terminus
biog2_v2.0_unigene841 biogeco2 v2.0 1002
AutoFact: Stigma-specific Stig1 family protein [Arabidopsis thaliana] gb|AAF87867.1|AC022520_11 Unknown protein [Arabidopsis thaliana] dbj|BAD43803.1| unknown protein [Arabidopsis thaliana] gb|AEE32894.1| Stigma-specific Stig1 family protein [Arabidopsis thaliana] 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: protein 9.39744e-37
Complete
biog2_v2.0_unigene919 biogeco2 v2.0 1009
AutoFact: wall-associated kinase 4-like [Oryza sativa Japonica Group] dbj|BAG94677.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
biog2_v2.0_unigene2376 biogeco2 v2.0 366
AutoFact: alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana] gb|ABE65859.1| hypothetical protein At2g24320 [Arabidopsis thaliana] gb|AEC07562.1| alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana] 0.0
Blast2go: abhydrolase domain-containing protein fam108c1-like 0.0
unknown
biog2_v2.0_unigene5618 biogeco2 v2.0 450
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 4.0e-27
Blast2go: histone h1 3.06217e-31
Putative coding
biog2_v2.0_unigene5857 biogeco2 v2.0 495
AutoFact: alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana] gb|ABE65859.1| hypothetical protein At2g24320 [Arabidopsis thaliana] gb|AEC07562.1| alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana] 0.0
Blast2go: abhydrolase domain-containing protein fam108c1-like 0.0
unknown
biog2_v2.0_unigene6060 biogeco2 v2.0 611
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 4.0e-27
FL-Next: tr=Putative histone H1; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h1 3.06217e-31
C-terminus
biog2_v2.0_unigene12679 biogeco2 v2.0 249
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM36_MARPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine protein 0.0
Internal
biog2_v2.0_unigene12997 biogeco2 v2.0 357
AutoFact: [R] COG1073 Hydrolases of the alpha/beta superfamily 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene13692 biogeco2 v2.0 356
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM34_MARPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene16426 biogeco2 v2.0 348
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM34_MARPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene16504 biogeco2 v2.0 281
AutoFact: [R] COG1073 Hydrolases of the alpha/beta superfamily 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene16675 biogeco2 v2.0 454
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM34_MARPO 0.0
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene16958 biogeco2 v2.0 465
AutoFact: wall-associated kinase 4-like [Oryza sativa Japonica Group] dbj|BAG94677.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
biog2_v2.0_unigene17569 biogeco2 v2.0 437
AutoFact: protein kinase domain-containing protein [Arabidopsis thaliana] gb|AAF26979.1|AC018363_24 putative protein kinase [Arabidopsis thaliana] gb|AAO42074.1| putative protein kinase [Arabidopsis thaliana] gb|AAO50475.1| putative protein kinase [Arabidopsis thal 4.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: receptor serine-threonine protein 1.04968e-40
Putative N-terminus
biog2_v2.0_unigene17595 biogeco2 v2.0 581
AutoFact: Protein kinase APK1B, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SPN3_RICCO 0.0
Blast2go: protein 0.0
unknown

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain