Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco2 v2.0

Name: K Homology domain, type 1

Term: IPR004088  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog2_v2.0_unigene890 biogeco2 v2.0 1027
• AutoFact: splicing factor 1 [Arabidopsis thaliana] ref|NP_851169.1| splicing factor 1 [Arabidopsis thaliana] ref|NP_001032055.1| splicing factor 1 [Arabidopsis thaliana] dbj|BAA97393.1| unnamed protein product [Arabidopsis thaliana] gb|AAN13087.1| unknown protein [ 7.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: splicing factor 1 0.0
Putative C-terminus
biog2_v2.0_unigene952 biogeco2 v2.0 605
• AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=5 Tax=core eudicotyledons RepID=B9IJV9_POPTR 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Blast2go: abc transporter b family member 19-like 0.0
Internal
biog2_v2.0_unigene1571 biogeco2 v2.0 462
• AutoFact: 3'-5' exonuclease domain-containing protein-like [Solanum tuberosum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 3 -5 exonuclease and kh-i domain-containing protein 0.0
Putative C-terminus
biog2_v2.0_unigene2249 biogeco2 v2.0 1448
• AutoFact: MDR-like ABC transporter n=1 Tax=Ginkgo biloba RepID=E6Y0T2_GINBI 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Blast2go: multidrug pheromone mdr abc transporter family 0.0
Internal
biog2_v2.0_unigene2491 biogeco2 v2.0 2898
• AutoFact: RNA-binding KH domain-containing protein [Arabidopsis thaliana] dbj|BAB08264.1| unnamed protein product [Arabidopsis thaliana] gb|AAK64022.1| unknown protein [Arabidopsis thaliana] gb|AAM44907.1| unknown protein [Arabidopsis thaliana] gb|AED95351.1| RNA-b 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
biog2_v2.0_unigene2995 biogeco2 v2.0 707
• AutoFact: Callose synthase n=1 Tax=Arabidopsis thaliana RepID=F4JDA3_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: callose synthase 10 0.0
C-terminus
biog2_v2.0_unigene3159 biogeco2 v2.0 496
• AutoFact: 3'-5' exonuclease domain-containing protein-like [Solanum tuberosum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 3 -5 exonuclease and kh-i domain-containing protein 0.0
Internal
biog2_v2.0_unigene3380 biogeco2 v2.0 434
• AutoFact: Multidrug/pheromone exporter protein n=1 Tax=Hevea brasiliensis RepID=F2YGT1_HEVBR 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Blast2go: abc transporter b family member 0.0
C-terminus
biog2_v2.0_unigene3542 biogeco2 v2.0 1839
• AutoFact: putative RNA binding protein [Oryza sativa Japonica Group] gb|ABF97724.1| KH domain containing protein, expressed [Oryza sativa Japonica Group] dbj|BAG90551.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEE59537.1| hypothetical protein OsJ_1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: poly -binding 0.0
Complete
biog2_v2.0_unigene3803 biogeco2 v2.0 418
• AutoFact: upstream element-binding protein [Arabidopsis thaliana] gb|AAL84954.1| F17H15.1/F17H15.1 [Arabidopsis thaliana] gb|AAM15002.1| unknown protein [Arabidopsis thaliana] gb|AAM15045.1| unknown protein [Arabidopsis thaliana] dbj|BAE98938.1| hypothetical protei 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: upstream element-binding protein 0.0
Putative N-terminus
biog2_v2.0_unigene3997 biogeco2 v2.0 1277
• AutoFact: RecName: Full=Zinc finger CCCH domain-containing protein 14; Short=OsC3H14 dbj|BAD15406.1| KH domain-containing protein-like [Oryza sativa Japonica Group] gb|EAY84850.1| hypothetical protein OsI_06216 [Oryza sativa Indica Group] gb|EAZ22072.1| hypothetica 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger ccch domain-containing protein 14-like 4.03372e-34
Putative Complete
biog2_v2.0_unigene4020 biogeco2 v2.0 1733
• AutoFact: KH domain containing protein, putative [Solanum demissum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: kh domain-containing protein at4g18375-like 0.0
C-terminus
biog2_v2.0_unigene4086 biogeco2 v2.0 906
• AutoFact: KH_1 domain containing protein 5.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: poly -binding 0.0
Complete
biog2_v2.0_unigene4094 biogeco2 v2.0 302
• AutoFact: pfam00013, KH_1, KH domain 8.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: kh domain-containing protein at4g18375-like 0.0
C-terminus
biog2_v2.0_unigene4526 biogeco2 v2.0 1462
• AutoFact: Putative KH-domain containing protein n=1 Tax=Medicago truncatula RepID=B3SGL8_MEDTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna-binding protein nova-1-like 0.0
C-terminus
biog2_v2.0_unigene4784 biogeco2 v2.0 2767
• AutoFact: RNA-binding KH domain-containing protein [Arabidopsis thaliana] ref|NP_197031.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana] dbj|BAF00580.1| hypothetical protein [Arabidopsis thaliana] dbj|BAF01176.1| hypothetical protein [Arabidopsis 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: kh domain-containing protein at4g18375-like 0.0
Complete
biog2_v2.0_unigene4836 biogeco2 v2.0 921
• AutoFact: putative callose synthase 1 catalytic subunit [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: callose synthase 0.0
Complete
biog2_v2.0_unigene5072 biogeco2 v2.0 1250
• AutoFact: [A] COG5176 Splicing factor (branch point binding protein) 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: kh domain-containing protein 0.0
Complete
biog2_v2.0_unigene5074 biogeco2 v2.0 716
• AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=5 Tax=core eudicotyledons RepID=B9IJV9_POPTR 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Blast2go: abc transporter b family member 19-like 0.0
C-terminus
biog2_v2.0_unigene5414 biogeco2 v2.0 1468
• AutoFact: RecName: Full=Zinc finger CCCH domain-containing protein 14; Short=OsC3H14 dbj|BAD15406.1| KH domain-containing protein-like [Oryza sativa Japonica Group] gb|EAY84850.1| hypothetical protein OsI_06216 [Oryza sativa Indica Group] gb|EAZ22072.1| hypothetica 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger ccch domain-containing protein 14-like 0.0
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain