Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: ABC transporter, integral membrane type 1

Term: IPR017940  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene372 biogeco2 v2.0 453
AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=2 Tax=Malpighiales RepID=B9IFR5_POPTR 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 1-like 0.0
Putative C-terminus
biog2_v2.0_unigene952 biogeco2 v2.0 605
AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=5 Tax=core eudicotyledons RepID=B9IJV9_POPTR 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 19-like 0.0
Internal
biog2_v2.0_unigene988 biogeco2 v2.0 914
AutoFact: putative ABC transporter [Hordeum vulgare subsp. vulgare] 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter family protein 0.0
Internal
biog2_v2.0_unigene1108 biogeco2 v2.0 393
AutoFact: RecName: Full=ABC transporter C family member 9; Short=ABC transporter ABCC.9; Short=AtABCC9; AltName: Full=ATP-energized glutathione S-conjugate pump 9; AltName: Full=Glutathione S-conjugate-transporting ATPase 9; AltName: Full=Multidrug resistance-assoc 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multidrug resistance protein abc transporter family 0.0
N-terminus
biog2_v2.0_unigene1306 biogeco2 v2.0 256
AutoFact: DUF659 domain containing protein 0.0
Blast2go: uncharacterized protein loc100852591 0.0
Putative coding
biog2_v2.0_unigene2249 biogeco2 v2.0 1448
AutoFact: MDR-like ABC transporter n=1 Tax=Ginkgo biloba RepID=E6Y0T2_GINBI 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: multidrug pheromone mdr abc transporter family 0.0
Internal
biog2_v2.0_unigene2781 biogeco2 v2.0 520
AutoFact: Multidrug resistance protein ABC transporter family (Fragment) n=2 Tax=Populus trichocarpa RepID=B9N9A1_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multidrug resistance protein abc transporter family 0.0
C-terminus
biog2_v2.0_unigene3380 biogeco2 v2.0 434
AutoFact: Multidrug/pheromone exporter protein n=1 Tax=Hevea brasiliensis RepID=F2YGT1_HEVBR 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 0.0
C-terminus
biog2_v2.0_unigene3486 biogeco2 v2.0 733
AutoFact: ABC transporter C family member 2 [Arabidopsis thaliana] ref|NP_001189675.1| ABC transporter C family member 2 [Arabidopsis thaliana] sp|Q42093.2|AB2C_ARATH RecName: Full=ABC transporter C family member 2; Short=ABC transporter ABCC.2; Short=AtABCC2; AltN 0.0
FL-Next: sp=ABC transporter C family member 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter c family member 2 0.0
C-terminus
biog2_v2.0_unigene3827 biogeco2 v2.0 529
AutoFact: RecName: Full=ABC transporter C family member 9; Short=ABC transporter ABCC.9; Short=AtABCC9; AltName: Full=ATP-energized glutathione S-conjugate pump 9; AltName: Full=Glutathione S-conjugate-transporting ATPase 9; AltName: Full=Multidrug resistance-assoc 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multidrug resistance protein abc transporter family 0.0
C-terminus
biog2_v2.0_unigene4563 biogeco2 v2.0 916
AutoFact: floral homeotic protein HUA1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger ccch domain-containing protein 37 0.0
Putative C-terminus
biog2_v2.0_unigene4794 biogeco2 v2.0 521
AutoFact: floral homeotic protein HUA1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger ccch domain-containing protein 37 0.0
Internal
biog2_v2.0_unigene5074 biogeco2 v2.0 716
AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=5 Tax=core eudicotyledons RepID=B9IJV9_POPTR 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 19-like 0.0
C-terminus
biog2_v2.0_unigene7289 biogeco2 v2.0 695
AutoFact: putative ABC transporter [Hordeum vulgare subsp. vulgare] 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter family protein 0.0
Putative C-terminus
biog2_v2.0_unigene8077 biogeco2 v2.0 292
AutoFact: floral homeotic protein HUA1 [Arabidopsis thaliana] 0.0
FL-Next: sp=Zinc finger CCCH domain-containing protein 37; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: zinc finger ccch domain-containing protein 37 0.0
Internal
biog2_v2.0_unigene8733 biogeco2 v2.0 326
AutoFact: DUF659 multi-domain protein 0.0
FL-Next: tr=DNA binding protein; Cucumis melo subsp. melo. 0.0
Blast2go: uncharacterized protein loc100247282 0.0
Putative N-terminus
biog2_v2.0_unigene9487 biogeco2 v2.0 539
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
C-terminus
biog2_v2.0_unigene9912 biogeco2 v2.0 340
AutoFact: ABC transporter C family member 2 [Arabidopsis thaliana] ref|NP_001189675.1| ABC transporter C family member 2 [Arabidopsis thaliana] sp|Q42093.2|AB2C_ARATH RecName: Full=ABC transporter C family member 2; Short=ABC transporter ABCC.2; Short=AtABCC2; AltN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter c family member 2 0.0
Internal
biog2_v2.0_unigene11690 biogeco2 v2.0 415
AutoFact: MRP-like ABC transporter n=2 Tax=Oryza sativa Japonica Group RepID=Q8GU62_ORYSJ 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter c family member 3 2.95916e-23
C-terminus
biog2_v2.0_unigene11919 biogeco2 v2.0 244
AutoFact: Peroxisomal abc transporter, putative n=1 Tax=Ricinus communis RepID=B9RQ07_RICCO 0.0
Blast2go: abc transporter d family member 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain