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Assembly Name: biogeco2 v2.0

Name: ABC transporter, integral membrane type 1

Term: IPR017940  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene12123 biogeco2 v2.0 526
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SJG4_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter family of the mitochondria family 0.0
Internal
biog2_v2.0_unigene12586 biogeco2 v2.0 577
AutoFact: Multidrug resistance-associated protein 1 n=1 Tax=Phaseolus vulgaris RepID=E3Q0A7_PHAVU 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter c family member 5-like 2.66787e-28
C-terminus
biog2_v2.0_unigene12645 biogeco2 v2.0 322
AutoFact: ABC transporter B family member 19 n=5 Tax=Camelineae RepID=AB19B_ARATH 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 19-like 0.0
N-terminus
biog2_v2.0_unigene13153 biogeco2 v2.0 400
AutoFact: MDR-like ABC transporter [Oryza sativa Japonica Group] 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 19-like 0.0
C-terminus
biog2_v2.0_unigene13751 biogeco2 v2.0 292
AutoFact: DUF659 domain containing protein 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100794155 0.0
C-terminus
biog2_v2.0_unigene13889 biogeco2 v2.0 378
AutoFact: RecName: Full=ABC transporter C family member 10; Short=ABC transporter ABCC.10; Short=AtABCC10; AltName: Full=ATP-energized glutathione S-conjugate pump 14; AltName: Full=Glutathione S-conjugate-transporting ATPase 14; AltName: Full=Multidrug resistance- 0.0
FL-Next: sp=ABC transporter C family member 10; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: multidrug resistance protein abc transporter family 0.0
Internal
biog2_v2.0_unigene14475 biogeco2 v2.0 412
AutoFact: MDR-like ABC transporter [Oryza sativa Japonica Group] 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 19-like 0.0
Internal
biog2_v2.0_unigene14937 biogeco2 v2.0 371
AutoFact: ABC transporter C family member 5 n=4 Tax=Arabidopsis RepID=AB5C_ARATH 0.0
FL-Next: sp=ABC transporter C family member 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter c family member 5-like 0.0
Internal
biog2_v2.0_unigene15051 biogeco2 v2.0 296
AutoFact: Multidrug resistance protein ABC transporter family (Fragment) n=2 Tax=Populus trichocarpa RepID=B9N9A1_POPTR 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: multidrug resistance protein abc transporter family 0.0
Internal
biog2_v2.0_unigene15353 biogeco2 v2.0 177
AutoFact: floral homeotic protein HUA1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger ccch domain-containing protein 37 0.0
Internal
biog2_v2.0_unigene15640 biogeco2 v2.0 314
AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=5 Tax=core eudicotyledons RepID=B9IJV9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter b family member 19-like 0.0
C-terminus
biog2_v2.0_unigene15692 biogeco2 v2.0 378
AutoFact: SAND family protein [Arabidopsis thaliana] gb|AAL10492.1| At2g28390/T1B3.9 [Arabidopsis thaliana] gb|AAD20687.2| expressed protein [Arabidopsis thaliana] gb|AAM91354.1| At2g28390/T1B3.9 [Arabidopsis thaliana] dbj|BAC42668.1| unknown protein [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sand family protein 0.0
Internal
biog2_v2.0_unigene15967 biogeco2 v2.0 458
AutoFact: Multidrug resistance-associated protein MRP1 (Fragment) n=1 Tax=Triticum aestivum RepID=Q8LGN7_WHEAT 4.00001e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter c family member 5-like 0.0
Putative C-terminus
biog2_v2.0_unigene16095 biogeco2 v2.0 373
AutoFact: DUF659 domain containing protein 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein loc100793012 2.01032e-26
Putative C-terminus
biog2_v2.0_unigene16368 biogeco2 v2.0 439
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: dna binding 0.0
Internal
biog2_v2.0_unigene16387 biogeco2 v2.0 314
AutoFact: MDR-like ABC transporter n=1 Tax=Ginkgo biloba RepID=E6Y0T2_GINBI 0.0
Blast2go: multidrug pheromone mdr abc transporter family 0.0
unknown
biog2_v2.0_unigene17210 biogeco2 v2.0 649
AutoFact: Multidrug resistance protein 1, 2, putative n=1 Tax=Ricinus communis RepID=B9RUH9_RICCO 9.94922e-44
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 0.0
Internal
biog2_v2.0_unigene17914 biogeco2 v2.0 889
AutoFact: DUF659 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100247282 0.0
Putative Complete
biog2_v2.0_unigene18061 biogeco2 v2.0 344
AutoFact: floral homeotic protein HUA1 [Arabidopsis thaliana] 0.0
Blast2go: zinc finger ccch domain-containing protein 37 0.0
unknown
biog2_v2.0_unigene18335 biogeco2 v2.0 905
AutoFact: MDR-like ABC transporter n=1 Tax=Ginkgo biloba RepID=E6Y0T2_GINBI 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: multidrug pheromone mdr abc transporter family 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain