Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: RNA helicase, DEAD-box type, Q motif

Term: IPR014014  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog2_v2.0_unigene4368 biogeco2 v2.0 804
• AutoFact: DEAD-box ATP-dependent RNA helicase 2 n=6 Tax=BEP clade RepID=RH2_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nicotiana eukaryotic translation initiation factor 4a 0.0
Internal
biog2_v2.0_unigene4797 biogeco2 v2.0 703
• AutoFact: DEAD-box ATP-dependent RNA helicase 6 n=6 Tax=BEP clade RepID=RH6_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 8-like 0.0
C-terminus
biog2_v2.0_unigene4958 biogeco2 v2.0 805
• AutoFact: DEAD-box ATP-dependent RNA helicase 2 n=6 Tax=BEP clade RepID=RH2_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nicotiana eukaryotic translation initiation factor 4a 0.0
C-terminus
biog2_v2.0_unigene7013 biogeco2 v2.0 700
• AutoFact: DEAD BOX RNA helicase RH15-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene7127 biogeco2 v2.0 583
• AutoFact: Putative chloroplast RNA helicase VDL isoform 1 n=3 Tax=Nicotiana tabacum RepID=Q9FE48_TOBAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 58 0.0
Internal
biog2_v2.0_unigene7268 biogeco2 v2.0 660
• AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 52C; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: protein 0.0
Putative C-terminus
biog2_v2.0_unigene7366 biogeco2 v2.0 483
• AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 9 0.0
• Blast2go: dead-box atp-dependent rna helicase 53-like 0.0
unknown
biog2_v2.0_unigene7671 biogeco2 v2.0 673
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9T0X5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 29-like 0.0
Internal
biog2_v2.0_unigene7894 biogeco2 v2.0 486
• AutoFact: MIP-T3 multi-domain protein 8.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box-like wd repeat-containing protein tbl1xr1-like 0.0
Internal
biog2_v2.0_unigene8337 biogeco2 v2.0 360
• AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
• Blast2go: protein 0.0
unknown
biog2_v2.0_unigene8430 biogeco2 v2.0 548
• AutoFact: DEAD-box ATP-dependent RNA helicase 36 [Arabidopsis thaliana] sp|Q9SA27.1|RH36_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 36 gb|AAD34681.1|AC006341_9 Similar to gb|L13612 DEAD-box protein (dbp45A) from Drosophila melanogaster and is a member 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 36-like 0.0
Internal
biog2_v2.0_unigene8531 biogeco2 v2.0 462
• AutoFact: DEAD box protein P68 [Pisum sativum] 0.0
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene8619 biogeco2 v2.0 512
• AutoFact: DEAD-box ATP-dependent RNA helicase 39 n=3 Tax=Oryza sativa RepID=RH39_ORYSJ 0.0
• Blast2go: dead-box atp-dependent rna helicase 39 0.0
Putative coding
biog2_v2.0_unigene9109 biogeco2 v2.0 433
• AutoFact: DEAD-box ATP-dependent RNA helicase 3 [Arabidopsis thaliana] gb|AAM26693.1| At5g26743 [Arabidopsis thaliana] gb|AAO42779.1| At5g26743 [Arabidopsis thaliana] gb|AED93564.1| DEAD-box ATP-dependent RNA helicase 3 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase chloroplastic-like 0.0
Internal
biog2_v2.0_unigene9258 biogeco2 v2.0 355
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S033_RICCO 0.0
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 50; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: dead-box atp-dependent rna helicase 50-like 0.0
Internal
biog2_v2.0_unigene9286 biogeco2 v2.0 899
• AutoFact: DEAD-box ATP-dependent RNA helicase 2 n=6 Tax=BEP clade RepID=RH2_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nicotiana eukaryotic translation initiation factor 4a 0.0
N-terminus
biog2_v2.0_unigene9301 biogeco2 v2.0 364
• AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 9 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 53-like 0.0
Internal
biog2_v2.0_unigene9304 biogeco2 v2.0 739
• AutoFact: putative F-box and leucine-rich repeat protein [Jatropha curcas] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box lrr-repeat protein 2-like 0.0
Internal
biog2_v2.0_unigene9387 biogeco2 v2.0 179
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SAD3_RICCO 0.0
• Blast2go: dead box rna helicase 0.0
unknown
biog2_v2.0_unigene9621 biogeco2 v2.0 138
• AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 9 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 53-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain