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Assembly Name: biogeco2 v2.0

Name: Clp, N-terminal

Term: IPR004176  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene513 biogeco2 v2.0 653
AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
Internal
biog2_v2.0_unigene638 biogeco2 v2.0 769
AutoFact: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] ref|NP_194863.4| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] dbj|BAC43211.1| unknown protein [Arabidops 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: core-2 i-branching beta- -n-acetylglucosaminyltransferase family protein 0.0
C-terminus
biog2_v2.0_unigene1173 biogeco2 v2.0 416
AutoFact: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] ref|NP_194863.4| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] dbj|BAC43211.1| unknown protein [Arabidops 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: core-2 i-branching beta- -n-acetylglucosaminyltransferase family protein 0.0
N-terminus
biog2_v2.0_unigene2470 biogeco2 v2.0 928
AutoFact: Double Clp-N motif protein [Arabidopsis thaliana] gb|AAK59640.1| unknown protein [Arabidopsis thaliana] gb|AAL15176.1| unknown protein [Arabidopsis thaliana] gb|AAM63872.1| unknown [Arabidopsis thaliana] gb|ACG24236.1| ATP-dependent Clp protease ATP-bindi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: clp protease-related protein chloroplastic-like 0.0
Complete
biog2_v2.0_unigene3122 biogeco2 v2.0 1088
AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
Internal
biog2_v2.0_unigene3367 biogeco2 v2.0 316
AutoFact: Heat shock protein 101 n=20 Tax=Poaceae RepID=HS101_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock protein 101 0.0
C-terminus
biog2_v2.0_unigene4337 biogeco2 v2.0 358
AutoFact: RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic; Flags: Precursor gb|AAA34161.1| ATP-dependent protease (CD4B) [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
Complete
biog2_v2.0_unigene5027 biogeco2 v2.0 970
AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
C-terminus
biog2_v2.0_unigene5088 biogeco2 v2.0 640
AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
FL-Next: sp=Chaperone protein ClpC1, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
N-terminus
biog2_v2.0_unigene5226 biogeco2 v2.0 2803
AutoFact: Heat shock protein 101 n=20 Tax=Poaceae RepID=HS101_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock protein 101 0.0
Putative Complete
biog2_v2.0_unigene5704 biogeco2 v2.0 561
AutoFact: Heat shock protein 101 n=20 Tax=Poaceae RepID=HS101_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock protein 101 0.0
Internal
biog2_v2.0_unigene8456 biogeco2 v2.0 475
AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
FL-Next: sp=ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
N-terminus
biog2_v2.0_unigene8583 biogeco2 v2.0 750
AutoFact: Chaperone clpb, putative n=1 Tax=Ricinus communis RepID=B9SJA7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
N-terminus
biog2_v2.0_unigene10825 biogeco2 v2.0 315
AutoFact: Chaperone clpb, putative n=1 Tax=Ricinus communis RepID=B9RNX1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein mitochondrial-like 0.0
Internal
biog2_v2.0_unigene10866 biogeco2 v2.0 207
AutoFact: Double Clp-N motif protein [Arabidopsis thaliana] gb|AAK59640.1| unknown protein [Arabidopsis thaliana] gb|AAL15176.1| unknown protein [Arabidopsis thaliana] gb|AAM63872.1| unknown [Arabidopsis thaliana] gb|ACG24236.1| ATP-dependent Clp protease ATP-bindi 4.0e-37
Blast2go: atp-dependent clp 0.0
unknown
biog2_v2.0_unigene12492 biogeco2 v2.0 428
AutoFact: Chaperone clpb, putative n=1 Tax=Ricinus communis RepID=B9RLP7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock protein 0.0
Internal
biog2_v2.0_unigene13373 biogeco2 v2.0 588
AutoFact: Double Clp-N motif protein [Arabidopsis thaliana] gb|AAK59640.1| unknown protein [Arabidopsis thaliana] gb|AAL15176.1| unknown protein [Arabidopsis thaliana] gb|AAM63872.1| unknown [Arabidopsis thaliana] gb|ACG24236.1| ATP-dependent Clp protease ATP-bindi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent clp protease atp-binding subunit clpa 0.0
N-terminus
biog2_v2.0_unigene14023 biogeco2 v2.0 373
AutoFact: ATP-dependent Clp protease ATP-binding subunit precursor [Oryza sativa Indica Group] 0.0
FL-Next: sp=Chaperone protein ClpD, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene14026 biogeco2 v2.0 229
AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
Putative N-terminus
biog2_v2.0_unigene15338 biogeco2 v2.0 474
AutoFact: ClpB [Phaseolus lunatus] 1.0e-38
Blast2go: chaperone protein clpb 2.10195e-42
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain