Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco2 v2.0

Name: DNA/RNA-binding protein Alba-like

Term: IPR002775  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene2568 biogeco2 v2.0 1000
AutoFact: Alba multi-domain protein 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog2_v2.0_unigene4142 biogeco2 v2.0 458
AutoFact: Alba DNA/RNA-binding protein [Arabidopsis thaliana] gb|AAF88114.1|AC021043_7 Unknown protein [Arabidopsis thaliana] gb|AAK97729.1| At1g29250/F28N24_8 [Arabidopsis thaliana] gb|AAL31130.1| At1g29250/F28N24_8 [Arabidopsis thaliana] gb|AAM63005.1| unknown [A 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene5989 biogeco2 v2.0 506
AutoFact: Alba DNA/RNA-binding protein [Arabidopsis thaliana] gb|AAF88114.1|AC021043_7 Unknown protein [Arabidopsis thaliana] gb|AAK97729.1| At1g29250/F28N24_8 [Arabidopsis thaliana] gb|AAL31130.1| At1g29250/F28N24_8 [Arabidopsis thaliana] gb|AAM63005.1| unknown [A 3.00018e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding protein 0.0
Complete
biog2_v2.0_unigene8183 biogeco2 v2.0 392
AutoFact: Alba multi-domain protein 3.0e-16
Blast2go: protein 0.0
Coding
biog2_v2.0_unigene10099 biogeco2 v2.0 223
AutoFact: Alba DNA/RNA-binding protein [Arabidopsis thaliana] gb|AAF88114.1|AC021043_7 Unknown protein [Arabidopsis thaliana] gb|AAK97729.1| At1g29250/F28N24_8 [Arabidopsis thaliana] gb|AAL31130.1| At1g29250/F28N24_8 [Arabidopsis thaliana] gb|AAM63005.1| unknown [A 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene13679 biogeco2 v2.0 421
AutoFact: aspartyl protease family protein [Arabidopsis thaliana] gb|ACE79041.1| At4g35880 [Arabidopsis thaliana] dbj|BAH19546.1| AT4G35880 [Arabidopsis thaliana] gb|AEE86584.1| aspartyl protease family protein [Arabidopsis thaliana] 0.0
Blast2go: aspartyl protease family protein 0.0
Putative coding
biog2_v2.0_unigene14030 biogeco2 v2.0 565
AutoFact: Alba DNA/RNA-binding protein [Arabidopsis thaliana] sp|O22969.1|Y2416_ARATH RecName: Full=Uncharacterized protein At2g34160 gb|AAB67633.1| expressed protein [Arabidopsis thaliana] gb|AAM60985.1| unknown [Arabidopsis thaliana] dbj|BAC42164.1| unknown prote 1.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog2_v2.0_unigene18115 biogeco2 v2.0 383
AutoFact: Aspartic proteinase nepenthesin-1, putative n=1 Tax=Ricinus communis RepID=B9SSL3_RICCO 0.0
FL-Next: tr=Aspartyl protease family protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: aspartic proteinase-like protein 1-like 0.0
Putative C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain