Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Single-stranded nucleic acid binding R3H

Term: IPR001374  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene407 biogeco2 v2.0 508
AutoFact: Unassigned protein
FL-Next: sp=NF-X1-type zinc finger protein NFXL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nf-x1-type zinc finger protein nfxl1-like 0.0
Internal
biog2_v2.0_unigene712 biogeco2 v2.0 1168
AutoFact: R3h domain containing protein, putative n=1 Tax=Ricinus communis RepID=B9SG72_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: r3h domain containing 0.0
C-terminus
biog2_v2.0_unigene752 biogeco2 v2.0 1386
AutoFact: R3h domain containing protein, putative n=1 Tax=Ricinus communis RepID=B9SG72_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: r3h domain containing 0.0
Putative Complete
biog2_v2.0_unigene975 biogeco2 v2.0 577
AutoFact: Potassium transporter HAK2p n=1 Tax=Mesembryanthemum crystallinum RepID=Q94KC6_MESCR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium transporter 2 0.0
Internal
biog2_v2.0_unigene1964 biogeco2 v2.0 473
AutoFact: R3h domain containing protein, putative n=1 Tax=Ricinus communis RepID=B9SG72_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: r3h domain containing 0.0
Internal
biog2_v2.0_unigene3195 biogeco2 v2.0 505
AutoFact: Potassium transporter HAK2p n=1 Tax=Mesembryanthemum crystallinum RepID=Q94KC6_MESCR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium transporter 2 0.0
C-terminus
biog2_v2.0_unigene3655 biogeco2 v2.0 459
AutoFact: R3h domain containing protein, putative n=1 Tax=Ricinus communis RepID=B9SG72_RICCO 0.0
Blast2go: r3h domain containing 0.0
unknown
biog2_v2.0_unigene9549 biogeco2 v2.0 558
AutoFact: putative potasium transporter [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium transporter 0.0
C-terminus
biog2_v2.0_unigene11719 biogeco2 v2.0 400
AutoFact: Potassium transporter HAK2p n=1 Tax=Mesembryanthemum crystallinum RepID=Q94KC6_MESCR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium transporter 2 0.0
N-terminus
biog2_v2.0_unigene12307 biogeco2 v2.0 94
AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 8.0e-07
Blast2go: probable atp-dependent rna helicase ythdc2-like 1.96745e-10
unknown
biog2_v2.0_unigene12761 biogeco2 v2.0 403
AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 8.0e-07
Blast2go: probable atp-dependent rna helicase ythdc2-like 1.96745e-10
unknown
biog2_v2.0_unigene15498 biogeco2 v2.0 255
AutoFact: Potassium transporter, putative n=1 Tax=Ricinus communis RepID=B9RGU8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium transporter 0.0
Internal
biog2_v2.0_unigene15659 biogeco2 v2.0 478
AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable atp-dependent rna helicase ythdc2-like 0.0
Putative N-terminus
biog2_v2.0_unigene15989 biogeco2 v2.0 388
AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 6.99949e-42
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: probable atp-dependent rna helicase ythdc2-like 0.0
Internal
biog2_v2.0_unigene16553 biogeco2 v2.0 397
AutoFact: potassium transporter 1 [Arabidopsis thaliana] sp|O22397.2|POT1_ARATH RecName: Full=Potassium transporter 1; Short=AtKT1; Short=AtKUP1; Short=AtPOT1 gb|AAB87687.1| potassium transporter [Arabidopsis thaliana] gb|AAB88901.1| high-affinity potassium transpo 0.0
FL-Next: sp=Probable potassium transporter 13; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: potassium transporter 1-like 0.0
Internal
biog2_v2.0_unigene16700 biogeco2 v2.0 236
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] gb|AED94034.1| putative DNA-binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein smubp-2-like 0.0
C-terminus
biog2_v2.0_unigene17324 biogeco2 v2.0 535
AutoFact: putative potasium transporter [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium transporter 0.0
Internal
biog2_v2.0_unigene17982 biogeco2 v2.0 73
AutoFact: putative potasium transporter [Oryza sativa Japonica Group] 0.0
Blast2go: potassium transporter 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain