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Assembly Name: biogeco2 v2.0

Name: Glycoside hydrolase, family 13, N-terminal

Term: IPR004193  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene474 biogeco2 v2.0 1233
AutoFact: RecName: Full=Putative transcription elongation factor SPT5 homolog 1 emb|CAB52557.1| putative protein [Arabidopsis thaliana] emb|CAB77960.1| putative protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Putative transcription elongation factor SPT5 homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: global transcription factor group 0.0
C-terminus
biog2_v2.0_unigene535 biogeco2 v2.0 577
AutoFact: 5'-AMP-activated protein kinase-like protein [Arabidopsis thaliana] gb|AAF79876.1|AC000348_29 T7N9.13 [Arabidopsis thaliana] gb|AEE30776.1| 5'-AMP-activated protein kinase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 5 -amp-activated protein kinase subunit beta-2 0.0
Internal
biog2_v2.0_unigene4097 biogeco2 v2.0 646
AutoFact: 1,4-alpha-glucan branching enzyme (Fragment) n=1 Tax=Solanum tuberosum RepID=O04864_SOLTU 0.0
FL-Next: Isoform 2 of 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SBE1 0.0
Blast2go: starch branching enzyme 1 0.0
Putative C-terminus
biog2_v2.0_unigene9815 biogeco2 v2.0 315
AutoFact: RecName: Full=Putative transcription elongation factor SPT5 homolog 1 emb|CAB52557.1| putative protein [Arabidopsis thaliana] emb|CAB77960.1| putative protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Putative transcription elongation factor SPT5 homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: global transcription factor group 0.0
Internal
biog2_v2.0_unigene10237 biogeco2 v2.0 338
AutoFact: Starch branching enzyme II-2 n=2 Tax=Malus x domestica RepID=A4GW34_MALDO 0.0
Blast2go: starch branching enzyme ii 0.0
unknown
biog2_v2.0_unigene10790 biogeco2 v2.0 257
AutoFact: Starch branching enzyme II-2 n=2 Tax=Malus x domestica RepID=A4GW34_MALDO 0.0
FL-Next: sp=1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic; Zea mays (Maize). 0.0
Blast2go: starch branching enzyme ii 0.0
Putative C-terminus
biog2_v2.0_unigene11703 biogeco2 v2.0 301
AutoFact: Starch branching enzyme II-2 n=2 Tax=Malus x domestica RepID=A4GW34_MALDO 0.0
FL-Next: sp=1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic; Zea mays (Maize). 0.0
Blast2go: starch branching enzyme ii 0.0
Internal
biog2_v2.0_unigene13769 biogeco2 v2.0 440
AutoFact: Starch branching enzyme II-2 n=2 Tax=Malus x domestica RepID=A4GW34_MALDO 0.0
FL-Next: sp=1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic; Zea mays (Maize). 0.0
Blast2go: starch branching enzyme ii 0.0
Internal
biog2_v2.0_unigene14039 biogeco2 v2.0 254
AutoFact: Isoamylase-type starch debranching enzyme ISO2 n=3 Tax=Andropogoneae RepID=B6UFP5_MAIZE 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: isoamylase-type starch debranching enzyme iso2 0.0
Putative C-terminus
biog2_v2.0_unigene14630 biogeco2 v2.0 397
AutoFact: 1,4-alpha-glucan branching enzyme (Fragment) n=1 Tax=Solanum tuberosum RepID=O04864_SOLTU 0.0
FL-Next: sp=1,4-alpha-glucan-branching enzyme; Solanum tuberosum (Potato). 0.0
Blast2go: starch branching enzyme 1 0.0
Internal
biog2_v2.0_unigene14967 biogeco2 v2.0 356
AutoFact: starch branching enzyme [Ipomoea batatas] 0.0
Blast2go: starch branching enzyme ii 0.0
unknown
biog2_v2.0_unigene15975 biogeco2 v2.0 265
AutoFact: RecName: Full=Putative transcription elongation factor SPT5 homolog 1 emb|CAB52557.1| putative protein [Arabidopsis thaliana] emb|CAB77960.1| putative protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Putative transcription elongation factor SPT5 homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: global transcription factor group 0.0
Internal
biog2_v2.0_unigene16054 biogeco2 v2.0 351
AutoFact: protein limit dextrinase [Arabidopsis thaliana] sp|Q8GTR4.2|PULA1_ARATH RecName: Full=Pullulanase 1, chloroplastic; Short=AtPU1; AltName: Full=Protein LIMIT DEXTRINASE; Short=AtLDA; Flags: Precursor gb|AED90732.1| protein limit dextrinase [Arabidopsis tha 0.0
Blast2go: pullulanase chloroplastic-like 0.0
unknown
biog2_v2.0_unigene19272 biogeco2 v2.0 488
AutoFact: 1,4-alpha-glucan branching enzyme (Fragment) n=1 Tax=Solanum tuberosum RepID=O04864_SOLTU 1.0e-36
FL-Next: Isoform 2 of 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SBE1 0.0
Blast2go: starch branching enzyme i 3.41917e-43
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain