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Assembly Name: biogeco2 v2.0

Name: ATPase, AAA-type, core

Term: IPR003959  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene16080 biogeco2 v2.0 242
AutoFact: polypyrimidine tract-binding protein 2 [Arabidopsis thaliana] sp|Q9FGL9.1|PTBP2_ARATH RecName: Full=Polypyrimidine tract-binding protein homolog 2 dbj|BAB08421.1| polypyrimidine tract-binding RNA transport protein-like [Arabidopsis thaliana] gb|AAU90050.1 2.0e-25
Blast2go: polypyrimidine tract binding 5.90211e-32
unknown
biog2_v2.0_unigene16090 biogeco2 v2.0 549
AutoFact: RecName: Full=Probable pleiotropic drug resistance protein 2 emb|CAD59566.1| PDR-like ABC transporter [Oryza sativa Japonica Group] tpg|DAA00885.1| TPA_exp: PDR2 ABC transporter [Oryza sativa (japonica cultivar-group)] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
biog2_v2.0_unigene16154 biogeco2 v2.0 243
AutoFact: ATP-dependent protease La, putative n=1 Tax=Ricinus communis RepID=B9SS30_RICCO 0.0
FL-Next: sp=Lon protease homolog 2, peroxisomal; Spinacia oleracea (Spinach). 0.0
Blast2go: atp-dependent protease 0.0
Internal
biog2_v2.0_unigene16199 biogeco2 v2.0 461
AutoFact: ATP-dependent peptidase, putative n=1 Tax=Ricinus communis RepID=B9RIL2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent zinc metalloprotease ftsh chloroplastic mitochondrial-like 0.0
Internal
biog2_v2.0_unigene16326 biogeco2 v2.0 340
AutoFact: PREDICTED: similar to ftsH-like protease n=1 Tax=Vitis vinifera RepID=UPI0001982E96 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent zinc metalloprotease ftsh mitochondrial-like 0.0
Internal
biog2_v2.0_unigene16488 biogeco2 v2.0 387
AutoFact: AAA-type ATPase-like protein n=3 Tax=Arabidopsis RepID=O64728_ARATH 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: aaa-type atpase-like protein 0.0
Internal
biog2_v2.0_unigene16540 biogeco2 v2.0 505
AutoFact: DNA mismatch repair protein PMS2 [Arabidopsis thaliana] gb|AAL01156.1| DNA mismatch repair protein [Arabidopsis thaliana] gb|AEE82175.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana] 2.99878e-43
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: mismatch repair endonuclease pms2-like 2.10195e-44
N-terminus
biog2_v2.0_unigene16725 biogeco2 v2.0 558
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9R8R6_RICCO 0.0
FL-Next: sp=Probable S-acyltransferase At4g15080; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: zinc finger 0.0
Internal
biog2_v2.0_unigene16856 biogeco2 v2.0 492
AutoFact: N-ethylmaleimide sensitive fusion protein [Nicotiana tabacum] 0.0
FL-Next: sp=Vesicle-fusing ATPase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: vesicle-fusing atpase-like 0.0
C-terminus
biog2_v2.0_unigene16873 biogeco2 v2.0 359
AutoFact: Isoform 2 of Lon protease homolog, mitochondrial n=2 Tax=Oryza sativa RepID=Q69UZ3-2 0.0
FL-Next: Isoform 2 of Lon protease homolog, mitochondrial OS=Oryza sativa subsp. japonica GN=Os07g0689300 0.0
Blast2go: lon protease homolog mitochondrial-like 0.0
Internal
biog2_v2.0_unigene17293 biogeco2 v2.0 169
AutoFact: Mitochondrial respiratory chain complexes assembly protein AFG3, putative (EC:3.6.4.3); K08956 AFG3 family protein [EC:3.4.24.-] 0.0
FL-Next: sp=ATP-dependent zinc metalloprotease FTSH 3, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene17364 biogeco2 v2.0 228
AutoFact: ATP-dependent peptidase, putative n=1 Tax=Ricinus communis RepID=B9RIL2_RICCO 0.0
Blast2go: atp-dependent zinc metalloprotease ftsh chloroplastic mitochondrial-like 0.0
unknown
biog2_v2.0_unigene17597 biogeco2 v2.0 261
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9T8B4_RICCO 0.0
Blast2go: probable mitochondrial chaperone bcs1-b-like 0.0
Coding
biog2_v2.0_unigene17715 biogeco2 v2.0 543
AutoFact: Transitional endoplasmic reticulum ATPase-like n=3 Tax=Oryza sativa RepID=Q6YUV9_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: p-loop containing ntpase domain-containing protein 0.0
C-terminus
biog2_v2.0_unigene17734 biogeco2 v2.0 600
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9R919_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cell division protein aaa atpase family 0.0
Internal
biog2_v2.0_unigene18213 biogeco2 v2.0 492
AutoFact: Vacuolar protein sorting-associated protein VPS4, putative n=3 Tax=Spermatophyta RepID=B9SCR4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vacuolar sorting protein 4b 0.0
C-terminus
biog2_v2.0_unigene18604 biogeco2 v2.0 1623
AutoFact: 26S protease regulatory subunit 7 homolog A n=26 Tax=Embryophyta RepID=PRS7A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: regulatory particle triple-a 1a 0.0
Complete
biog2_v2.0_unigene18894 biogeco2 v2.0 367
AutoFact: AAA ATPase; 26S proteasome subunit P45 [Medicago truncatula] gb|ABN08912.1| AAA ATPase; 26S proteasome subunit P45 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene18960 biogeco2 v2.0 335
AutoFact: putative PDR-like ABC transporter [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-binding cassette 0.0
Internal
biog2_v2.0_unigene19073 biogeco2 v2.0 645
AutoFact: RecName: Full=Probable pleiotropic drug resistance protein 2 emb|CAD59566.1| PDR-like ABC transporter [Oryza sativa Japonica Group] tpg|DAA00885.1| TPA_exp: PDR2 ABC transporter [Oryza sativa (japonica cultivar-group)] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain