Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: RNA-binding S4 domain

Term: IPR002942  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene2223 biogeco2 v2.0 921
AutoFact: S4/Hsp/ tRNA synthetase RNA-binding domain-containing protein [Arabidopsis thaliana] dbj|BAD42946.1| ribosomal protein-like [Arabidopsis thaliana] gb|ABF83660.1| At5g15750 [Arabidopsis thaliana] gb|AED92201.1| S4/Hsp/ tRNA synthetase RNA-binding domain-co 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
biog2_v2.0_unigene3867 biogeco2 v2.0 862
AutoFact: 40S ribosomal protein S9, putative n=5 Tax=fabids RepID=B9RUP5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein 0.0
Complete
biog2_v2.0_unigene4248 biogeco2 v2.0 156
AutoFact: Ribosomal protein S4 n=1 Tax=Cycas taitungensis RepID=B0BLG9_CYCTA 0.0
Blast2go: ribosomal protein s4 0.0
unknown
biog2_v2.0_unigene5201 biogeco2 v2.0 1026
AutoFact: 40S ribosomal S4 protein [Glycine max] gb|ACU21252.1| unknown [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog2_v2.0_unigene5401 biogeco2 v2.0 1004
AutoFact: 40S ribosomal protein S9, putative n=5 Tax=fabids RepID=B9RUP5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein 0.0
Complete
biog2_v2.0_unigene6347 biogeco2 v2.0 1229
AutoFact: 40S ribosomal S4 protein [Glycine max] gb|ACU21252.1| unknown [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s4 0.0
Complete
biog2_v2.0_unigene13957 biogeco2 v2.0 241
AutoFact: Ribosomal protein S4 (Fragment) n=1 Tax=Nicotiana tabacum RepID=Q5M9U0_TOBAC 0.0
FL-Next: sp=Ribosomal protein S4, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: ribosomal protein s4 0.0
Internal
biog2_v2.0_unigene14912 biogeco2 v2.0 433
AutoFact: RNA pseudourine synthase 7 [Arabidopsis thaliana] sp|Q9LU60.1|PUS7_ARATH RecName: Full=RNA pseudourine synthase 7; AltName: Full=RNA pseudouridylate synthase 7; AltName: Full=RNA-uridine isomerase 7 dbj|BAA97376.1| unnamed protein product [Arabidopsis tha 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna pseudourine synthase 7 0.0
Internal
biog2_v2.0_unigene16863 biogeco2 v2.0 383
AutoFact: putative hemolysin [Arabidopsis thaliana] dbj|BAB01316.1| hemolysin-like [Arabidopsis thaliana] gb|AAM65296.1| hemolysin, putative [Arabidopsis thaliana] gb|AEE77014.1| putative hemolysin [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein yqxc-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain