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Assembly Name: biogeco2 v2.0

Name: Aminoacyl-tRNA synthetase, class II

Term: IPR006195  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene57 biogeco2 v2.0 584
AutoFact: histidyl-tRNA synthetase [Triticum aestivum] 0.0
FL-Next: sp=Histidyl-tRNA synthetase; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: histidyl-trna synthetase 0.0
Putative C-terminus
biog2_v2.0_unigene235 biogeco2 v2.0 567
AutoFact: RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase emb|CAB11470.1| seryl-tRNA synthetase [Helianthus annuus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: seryl-trna synthetase 0.0
C-terminus
biog2_v2.0_unigene1164 biogeco2 v2.0 554
AutoFact: Prolyl-tRNA synthetase, putative n=1 Tax=Ricinus communis RepID=B9RN41_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog2_v2.0_unigene1532 biogeco2 v2.0 619
AutoFact: threonyl-tRNA synthetase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: threonyl-trna synthetase 0.0
C-terminus
biog2_v2.0_unigene2426 biogeco2 v2.0 399
AutoFact: aspartyl-tRNA synthetase [Arabidopsis thaliana] ref|NP_194847.3| aspartyl-tRNA synthetase [Arabidopsis thaliana] emb|CAB79836.1| aspartate--tRNA ligase-like protein [Arabidopsis thaliana] dbj|BAH20270.1| AT4G31180 [Arabidopsis thaliana] gb|AEE85872.1| asp 0.0
Blast2go: aspartyl-trna synthetase 0.0
unknown
biog2_v2.0_unigene2607 biogeco2 v2.0 1317
AutoFact: aspartyl-tRNA synthetase [Arabidopsis thaliana] ref|NP_194847.3| aspartyl-tRNA synthetase [Arabidopsis thaliana] emb|CAB79836.1| aspartate--tRNA ligase-like protein [Arabidopsis thaliana] dbj|BAH20270.1| AT4G31180 [Arabidopsis thaliana] gb|AEE85872.1| asp 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aspartyl-trna synthetase 0.0
C-terminus
biog2_v2.0_unigene2683 biogeco2 v2.0 445
AutoFact: phenylalanyl-tRNA synthetase alpha chain [Arabidopsis thaliana] sp|Q9T034.3|SYFA_ARATH RecName: Full=Probable phenylalanyl-tRNA synthetase alpha chain; AltName: Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS gb|AAM19830.1| AT4g39280/T22F8_180 [A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phenylalanyl-trna synthetase alpha chain 0.0
C-terminus
biog2_v2.0_unigene2718 biogeco2 v2.0 785
AutoFact: asparaginyl-tRNA synthetase, cytoplasmic 1 [Arabidopsis thaliana] sp|Q9SW96.1|SYNC1_ARATH RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic 1; AltName: Full=Asparagine--tRNA ligase 1; Short=AsnRS 1; AltName: Full=Protein EMBRYO DEFECTIVE 2755 gb|AAD4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: asparaginyl-trna cytoplasmic 1-like 0.0
C-terminus
biog2_v2.0_unigene3133 biogeco2 v2.0 1488
AutoFact: Lysyl-tRNA synthetase (Fragment) n=6 Tax=Magnoliophyta RepID=D7U9T8_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lysyl-trna synthetase 0.0
Putative C-terminus
biog2_v2.0_unigene7307 biogeco2 v2.0 815
AutoFact: RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase emb|CAB11470.1| seryl-tRNA synthetase [Helianthus annuus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: seryl-trna synthetase 0.0
N-terminus
biog2_v2.0_unigene7647 biogeco2 v2.0 738
AutoFact: prolyl-tRNA synthetase [Arabidopsis thaliana] ref|NP_850736.1| prolyl-tRNA synthetase [Arabidopsis thaliana] emb|CAB71872.1| multifunctional aminoacyl-tRNA ligase-like protein [Arabidopsis thaliana] gb|AAL24294.1| multifunctional aminoacyl-tRNA ligase-lik 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene7682 biogeco2 v2.0 589
AutoFact: prolyl-tRNA synthetase [Arabidopsis thaliana] ref|NP_850736.1| prolyl-tRNA synthetase [Arabidopsis thaliana] emb|CAB71872.1| multifunctional aminoacyl-tRNA ligase-like protein [Arabidopsis thaliana] gb|AAL24294.1| multifunctional aminoacyl-tRNA ligase-lik 0.0
FL-Next: tr=Putative uncharacterized protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene8945 biogeco2 v2.0 498
AutoFact: Histidyl-tRNA synthetase n=3 Tax=Andropogoneae RepID=B6TS97_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein Sb03g003570; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene9268 biogeco2 v2.0 204
AutoFact: Lysyl-tRNA synthetase (Fragment) n=6 Tax=Magnoliophyta RepID=D7U9T8_VITVI 0.0
FL-Next: sp=Lysyl-tRNA synthetase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: lysyl-trna synthetase 0.0
Internal
biog2_v2.0_unigene9367 biogeco2 v2.0 282
AutoFact: aspartyl-tRNA synthetase [Arabidopsis thaliana] ref|NP_194847.3| aspartyl-tRNA synthetase [Arabidopsis thaliana] emb|CAB79836.1| aspartate--tRNA ligase-like protein [Arabidopsis thaliana] dbj|BAH20270.1| AT4G31180 [Arabidopsis thaliana] gb|AEE85872.1| asp 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aspartyl-trna synthetase 0.0
Putative N-terminus
biog2_v2.0_unigene11088 biogeco2 v2.0 248
AutoFact: asparaginyl-tRNA synthetase, cytoplasmic 1 [Arabidopsis thaliana] sp|Q9SW96.1|SYNC1_ARATH RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic 1; AltName: Full=Asparagine--tRNA ligase 1; Short=AsnRS 1; AltName: Full=Protein EMBRYO DEFECTIVE 2755 gb|AAD4 0.0
FL-Next: sp=Asparaginyl-tRNA synthetase, cytoplasmic 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: asparaginyl-trna cytoplasmic 1-like 0.0
Internal
biog2_v2.0_unigene11928 biogeco2 v2.0 174
AutoFact: asparaginyl-tRNA synthetase, cytoplasmic 1 [Arabidopsis thaliana] sp|Q9SW96.1|SYNC1_ARATH RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic 1; AltName: Full=Asparagine--tRNA ligase 1; Short=AsnRS 1; AltName: Full=Protein EMBRYO DEFECTIVE 2755 gb|AAD4 0.0
FL-Next: sp=Asparaginyl-tRNA synthetase, cytoplasmic 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: asparaginyl-trna cytoplasmic 1-like 0.0
Internal
biog2_v2.0_unigene11981 biogeco2 v2.0 358
AutoFact: phenylalanyl-tRNA synthetase alpha chain [Arabidopsis thaliana] sp|Q9T034.3|SYFA_ARATH RecName: Full=Probable phenylalanyl-tRNA synthetase alpha chain; AltName: Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS gb|AAM19830.1| AT4g39280/T22F8_180 [A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phenylalanyl-trna synthetase alpha chain 0.0
Internal
biog2_v2.0_unigene12039 biogeco2 v2.0 451
AutoFact: aspartyl-tRNA synthetase [Arabidopsis thaliana] ref|NP_194847.3| aspartyl-tRNA synthetase [Arabidopsis thaliana] emb|CAB79836.1| aspartate--tRNA ligase-like protein [Arabidopsis thaliana] dbj|BAH20270.1| AT4G31180 [Arabidopsis thaliana] gb|AEE85872.1| asp 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aspartyl-trna synthetase 0.0
Internal
biog2_v2.0_unigene13374 biogeco2 v2.0 282
AutoFact: asparaginyl-tRNA synthetase [Arabidopsis thaliana] sp|O48593.3|SYNO_ARATH RecName: Full=Asparaginyl-tRNA synthetase, chloroplastic/mitochondrial; AltName: Full=Asparagine--tRNA ligase; Short=AsnRS; Flags: Precursor gb|AAL84964.1| AT4g17300/dl4685w [Arabid 0.0
Blast2go: protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain