Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: DNA-directed RNA polymerase, subunit 2

Term: IPR015712  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene1162 biogeco2 v2.0 433
AutoFact: DNA-directed RNA polymerase n=26 Tax=Embryophyta RepID=A9SJE5_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna polymerase ii second largest subunit 0.0
C-terminus
biog2_v2.0_unigene3385 biogeco2 v2.0 1025
AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bhlh transcription factor 0.0
Complete
biog2_v2.0_unigene5545 biogeco2 v2.0 1125
AutoFact: Transcription factor bHLH62 n=1 Tax=Arabidopsis thaliana RepID=BH062_ARATH 7.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bpe 0.0
Complete
biog2_v2.0_unigene8294 biogeco2 v2.0 536
AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bhlh62-like 0.0
C-terminus
biog2_v2.0_unigene10177 biogeco2 v2.0 485
AutoFact: DNA-directed RNA polymerase n=26 Tax=Embryophyta RepID=A9SJE5_PHYPA 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit beta; Pinus attenuata (Knobcone pine). Plastid; Chloroplast. 0.0
Blast2go: rna polymerase ii second largest subunit 0.0
Internal
biog2_v2.0_unigene12352 biogeco2 v2.0 347
AutoFact: DNA-directed RNA polymerase n=26 Tax=Embryophyta RepID=A9SJE5_PHYPA 0.0
Blast2go: rna polymerase ii second largest subunit 0.0
unknown
biog2_v2.0_unigene12390 biogeco2 v2.0 332
AutoFact: BHLH transcription factor PTF1-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q6EPZ6_ORYSJ 9.94922e-44
Blast2go: transcription factor bhlh66-like 0.0
unknown
biog2_v2.0_unigene13627 biogeco2 v2.0 308
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Solanum lycopersicum RepID=Q1L6V6_SOLLC 3.0e-27
FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
Blast2go: nuclear rna polymerase d2a 1.18154e-31
Internal
biog2_v2.0_unigene15705 biogeco2 v2.0 412
AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 4.0e-29
Blast2go: bhlh transcription factor 0.0
Putative coding
biog2_v2.0_unigene18027 biogeco2 v2.0 357
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 0.0
FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
Blast2go: rna polymerase iv second largest subunit 0.0
Internal
biog2_v2.0_unigene18071 biogeco2 v2.0 398
AutoFact: transcription factor bHLH76 [Arabidopsis thaliana] gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana] emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana] gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana] 3.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bhlh76 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain