Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: DNA methylase, N-4 cytosine-specific, conserved site

Term: IPR017985  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene79 biogeco2 v2.0 527
AutoFact: LOB domain-containing protein 4 [Arabidopsis thaliana] sp|Q9SHE9.1|LBD4_ARATH RecName: Full=LOB domain-containing protein 4; AltName: Full=ASYMMETRIC LEAVES 2-like protein 6; Short=AS2-like protein 6 gb|AAF24588.1|AC007654_4 T19E23.11 [Arabidopsis thalian 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lob domain-containing protein 4-like 0.0
N-terminus
biog2_v2.0_unigene348 biogeco2 v2.0 709
AutoFact: Putative auxin response factor 2/1/9 (Fragment) n=1 Tax=Cycas rumphii RepID=E1UHY0_CYCRU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor 2 0.0
Putative N-terminus
biog2_v2.0_unigene3340 biogeco2 v2.0 937
AutoFact: duplicated SANT DNA-binding domain-containing protein [Arabidopsis thaliana] dbj|BAB10001.1| unnamed protein product [Arabidopsis thaliana] gb|AAL59913.1| unknown protein [Arabidopsis thaliana] gb|AAM20221.1| unknown protein [Arabidopsis thaliana] gb|AAS1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Putative Complete
biog2_v2.0_unigene3624 biogeco2 v2.0 1418
AutoFact: auxin response factor 3 [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
biog2_v2.0_unigene3820 biogeco2 v2.0 444
AutoFact: auxin response factor 2 [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor-like protein 0.0
C-terminus
biog2_v2.0_unigene4057 biogeco2 v2.0 1187
AutoFact: auxin response factor 3 [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
biog2_v2.0_unigene4480 biogeco2 v2.0 512
AutoFact: LOB domain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S4B8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lob domain-containing protein 0.0
Putative Complete
biog2_v2.0_unigene4569 biogeco2 v2.0 1405
AutoFact: WS03717.C21_H15 SS-B-N-22 Picea sitchensis cDNA clone WS03717_H15 3', mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
C-terminus
biog2_v2.0_unigene4765 biogeco2 v2.0 1252
AutoFact: Putative auxin response factor 2/1/9 (Fragment) n=1 Tax=Cycas rumphii RepID=E1UHY0_CYCRU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor 2 0.0
C-terminus
biog2_v2.0_unigene7032 biogeco2 v2.0 724
AutoFact: auxin response factor 2 [Arabidopsis thaliana] ref|NP_201006.2| auxin response factor 2 [Arabidopsis thaliana] ref|NP_974980.1| auxin response factor 2 [Arabidopsis thaliana] sp|Q94JM3.2|ARFB_ARATH RecName: Full=Auxin response factor 2; AltName: Full=ARF1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor 2 0.0
Putative C-terminus
biog2_v2.0_unigene7684 biogeco2 v2.0 336
AutoFact: auxin response factor 2 [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor-like protein 0.0
Internal
biog2_v2.0_unigene7998 biogeco2 v2.0 571
AutoFact: asymmetric leaves 2 [Carica papaya] 0.0
Blast2go: lob domain-containing protein 6 0.0
unknown
biog2_v2.0_unigene8096 biogeco2 v2.0 580
AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ginkgo biloba RepID=E1UHX7_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor 6-like 0.0
Internal
biog2_v2.0_unigene9092 biogeco2 v2.0 712
AutoFact: putative mandelonitrile lyase [Arabidopsis thaliana] gb|AAD55652.1|AC008017_25 Similar to (R)-mandelonitrile lyase isoform 1 precursor [Arabidopsis thaliana] gb|AEE35408.1| putative mandelonitrile lyase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mandelonitrile lyase 0.0
Internal
biog2_v2.0_unigene9539 biogeco2 v2.0 411
AutoFact: MYB transcription factor [Hevea brasiliensis] 0.0
Blast2go: dna binding 0.0
unknown
biog2_v2.0_unigene9956 biogeco2 v2.0 608
AutoFact: auxin response factor 6 [Arabidopsis thaliana] sp|Q9ZTX8.2|ARFF_ARATH RecName: Full=Auxin response factor 6 gb|AAT67072.1| ARF6 [Arabidopsis thaliana] gb|AEE31207.1| auxin response factor 6 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response factor 6-like 0.0
Internal
biog2_v2.0_unigene10185 biogeco2 v2.0 476
AutoFact: WS03717.C21_H15 SS-B-N-22 Picea sitchensis cDNA clone WS03717_H15 3', mRNA sequence. 0.0
Blast2go: uncharacterized protein 0.0
unknown
biog2_v2.0_unigene10548 biogeco2 v2.0 417
AutoFact: auxin response factor 2 [Arabidopsis thaliana] ref|NP_201006.2| auxin response factor 2 [Arabidopsis thaliana] ref|NP_974980.1| auxin response factor 2 [Arabidopsis thaliana] sp|Q94JM3.2|ARFB_ARATH RecName: Full=Auxin response factor 2; AltName: Full=ARF1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor 2 0.0
Internal
biog2_v2.0_unigene10954 biogeco2 v2.0 242
AutoFact: auxin response factor 3 [Cucumis sativus] 0.0
unknown
biog2_v2.0_unigene11428 biogeco2 v2.0 293
AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ginkgo biloba RepID=E1UHX7_GINBI 0.0
FL-Next: sp=Auxin response factor 6; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: auxin response factor 6-like 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain