Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Smr protein/MutS2 C-terminal

Term: IPR002625  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene348 biogeco2 v2.0 709
AutoFact: Putative auxin response factor 2/1/9 (Fragment) n=1 Tax=Cycas rumphii RepID=E1UHY0_CYCRU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor 2 0.0
Putative N-terminus
biog2_v2.0_unigene398 biogeco2 v2.0 844
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R930_RICCO 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At1g18900; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
biog2_v2.0_unigene2801 biogeco2 v2.0 566
AutoFact: COPZ2; Zeta2-COP 5.0e-14
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene3624 biogeco2 v2.0 1418
AutoFact: auxin response factor 3 [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
biog2_v2.0_unigene3820 biogeco2 v2.0 444
AutoFact: auxin response factor 2 [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor-like protein 0.0
C-terminus
biog2_v2.0_unigene4057 biogeco2 v2.0 1187
AutoFact: auxin response factor 3 [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
biog2_v2.0_unigene4426 biogeco2 v2.0 792
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RQZ0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 0.0
C-terminus
biog2_v2.0_unigene4765 biogeco2 v2.0 1252
AutoFact: Putative auxin response factor 2/1/9 (Fragment) n=1 Tax=Cycas rumphii RepID=E1UHY0_CYCRU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor 2 0.0
C-terminus
biog2_v2.0_unigene7032 biogeco2 v2.0 724
AutoFact: auxin response factor 2 [Arabidopsis thaliana] ref|NP_201006.2| auxin response factor 2 [Arabidopsis thaliana] ref|NP_974980.1| auxin response factor 2 [Arabidopsis thaliana] sp|Q94JM3.2|ARFB_ARATH RecName: Full=Auxin response factor 2; AltName: Full=ARF1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor 2 0.0
Putative C-terminus
biog2_v2.0_unigene7684 biogeco2 v2.0 336
AutoFact: auxin response factor 2 [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor-like protein 0.0
Internal
biog2_v2.0_unigene8096 biogeco2 v2.0 580
AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ginkgo biloba RepID=E1UHX7_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor 6-like 0.0
Internal
biog2_v2.0_unigene9956 biogeco2 v2.0 608
AutoFact: auxin response factor 6 [Arabidopsis thaliana] sp|Q9ZTX8.2|ARFF_ARATH RecName: Full=Auxin response factor 6 gb|AAT67072.1| ARF6 [Arabidopsis thaliana] gb|AEE31207.1| auxin response factor 6 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response factor 6-like 0.0
Internal
biog2_v2.0_unigene10380 biogeco2 v2.0 431
AutoFact: ARF-L2 protein (Fragment) n=1 Tax=Ginkgo biloba RepID=D4HTT9_GINBI 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response factor 2 0.0
Internal
biog2_v2.0_unigene10548 biogeco2 v2.0 417
AutoFact: auxin response factor 2 [Arabidopsis thaliana] ref|NP_201006.2| auxin response factor 2 [Arabidopsis thaliana] ref|NP_974980.1| auxin response factor 2 [Arabidopsis thaliana] sp|Q94JM3.2|ARFB_ARATH RecName: Full=Auxin response factor 2; AltName: Full=ARF1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor 2 0.0
Internal
biog2_v2.0_unigene10954 biogeco2 v2.0 242
AutoFact: auxin response factor 3 [Cucumis sativus] 0.0
unknown
biog2_v2.0_unigene11037 biogeco2 v2.0 414
AutoFact: pfkB-like carbohydrate kinase family protein [Arabidopsis thaliana] gb|AAL24260.1| AT5g58730/mzn1_180 [Arabidopsis thaliana] gb|AAM61052.1| unknown [Arabidopsis thaliana] gb|AAM65354.1| AT5g58730/mzn1_180 [Arabidopsis thaliana] gb|AED97092.1| pfkB-like ca 0.0
Blast2go: protein 0.0
Coding
biog2_v2.0_unigene11073 biogeco2 v2.0 299
AutoFact: Unassigned protein
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene11428 biogeco2 v2.0 293
AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ginkgo biloba RepID=E1UHX7_GINBI 0.0
FL-Next: sp=Auxin response factor 6; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: auxin response factor 6-like 0.0
Putative N-terminus
biog2_v2.0_unigene11844 biogeco2 v2.0 591
AutoFact: Pentatricopeptide-containing protein (Fragment) n=3 Tax=Pseudotsuga RepID=C6F9Z2_PSEMZ 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At1g18900; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide-containing protein 0.0
Putative C-terminus
biog2_v2.0_unigene11891 biogeco2 v2.0 330
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RQZ0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain