Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Helix-loop-helix DNA-binding

Term: IPR011598  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog2_v2.0_unigene679 biogeco2 v2.0 488
• AutoFact: bHLH transcription factor [Lilium hybrid division I] 4.2039e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: bhlh transcription factor 0.0
C-terminus
biog2_v2.0_unigene865 biogeco2 v2.0 621
• AutoFact: putative MYC transcription factor [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=JAMYC; Taxus cuspidata (Japanese yew). 0.0
• Blast2go: transcription factor 0.0
C-terminus
biog2_v2.0_unigene3320 biogeco2 v2.0 528
• AutoFact: BHLH-like DNA binding protein n=2 Tax=Vitis vinifera RepID=B7SNG3_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor tt8 0.0
C-terminus
biog2_v2.0_unigene3385 biogeco2 v2.0 1025
• AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 4.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: bhlh transcription factor 0.0
Complete
biog2_v2.0_unigene3496 biogeco2 v2.0 389
• AutoFact: cwf21 domain containing protein 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: uncharacterized protein 1.75099e-37
Putative N-terminus
biog2_v2.0_unigene3656 biogeco2 v2.0 401
• AutoFact: bHLH transcription factor [Arabidopsis thaliana] 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene3949 biogeco2 v2.0 964
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor bhlh113-like 0.0
C-terminus
biog2_v2.0_unigene3967 biogeco2 v2.0 498
• AutoFact: HLH domain containing protein 4.0e-13
• Blast2go: transcription factor bim1 0.0
Coding
biog2_v2.0_unigene4953 biogeco2 v2.0 958
• AutoFact: basic helix-loop-helix (bHLH) family transcription factor [Brassica oleracea] 8.0e-17
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: protein 2.15029e-21
Complete
biog2_v2.0_unigene5545 biogeco2 v2.0 1125
• AutoFact: Transcription factor bHLH62 n=1 Tax=Arabidopsis thaliana RepID=BH062_ARATH 7.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor bpe 0.0
Complete
biog2_v2.0_unigene7189 biogeco2 v2.0 901
• AutoFact: transcription factor FAMA [Arabidopsis thaliana] sp|Q56YJ8.1|FAMA_ARATH RecName: Full=Transcription factor FAMA; AltName: Full=Basic helix-loop-helix protein 97; Short=AtbHLH97; Short=bHLH 97; AltName: Full=Transcription factor EN 14; AltName: Full=bHLH t 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor bhlh96-like 0.0
N-terminus
biog2_v2.0_unigene7388 biogeco2 v2.0 668
• AutoFact: pfam00010, HLH, Helix-loop-helix DNA-binding domain 2.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor bhlh62-like 0.0
C-terminus
biog2_v2.0_unigene7999 biogeco2 v2.0 554
• AutoFact: transcription factor FAMA [Arabidopsis thaliana] sp|Q56YJ8.1|FAMA_ARATH RecName: Full=Transcription factor FAMA; AltName: Full=Basic helix-loop-helix protein 97; Short=AtbHLH97; Short=bHLH 97; AltName: Full=Transcription factor EN 14; AltName: Full=bHLH t 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor bhlh96-like 0.0
C-terminus
biog2_v2.0_unigene8294 biogeco2 v2.0 536
• AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor bhlh62-like 0.0
C-terminus
biog2_v2.0_unigene8415 biogeco2 v2.0 408
• AutoFact: HLH domain containing protein 4.0e-13
• Blast2go: transcription factor bim1 0.0
unknown
biog2_v2.0_unigene8475 biogeco2 v2.0 501
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RRL5_RICCO 0.0
• Blast2go: transcription factor bhlh62-like 0.0
unknown
biog2_v2.0_unigene8479 biogeco2 v2.0 383
• AutoFact: transcription factor FAMA [Arabidopsis thaliana] sp|Q56YJ8.1|FAMA_ARATH RecName: Full=Transcription factor FAMA; AltName: Full=Basic helix-loop-helix protein 97; Short=AtbHLH97; Short=bHLH 97; AltName: Full=Transcription factor EN 14; AltName: Full=bHLH t 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor bhlh96-like 0.0
Internal
biog2_v2.0_unigene8705 biogeco2 v2.0 388
• AutoFact: Basic helix-loop-helix family protein-like protein (Fragment) n=4 Tax=Picea sitchensis RepID=E0ZL73_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: basic helix-loop-helix family protein 0.0
C-terminus
biog2_v2.0_unigene8774 biogeco2 v2.0 491
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RRL5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor bhlh62-like 0.0
Internal
biog2_v2.0_unigene10092 biogeco2 v2.0 461
• AutoFact: pfam00010, HLH, Helix-loop-helix DNA-binding domain 5.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor bhlh49 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain