Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco2 v2.0

Name: Helix-loop-helix DNA-binding

Term: IPR011598  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene10277 biogeco2 v2.0 470
AutoFact: transcription factor FAMA [Arabidopsis thaliana] sp|Q56YJ8.1|FAMA_ARATH RecName: Full=Transcription factor FAMA; AltName: Full=Basic helix-loop-helix protein 97; Short=AtbHLH97; Short=bHLH 97; AltName: Full=Transcription factor EN 14; AltName: Full=bHLH t 0.0
Blast2go: transcription factor bhlh96-like 0.0
unknown
biog2_v2.0_unigene10497 biogeco2 v2.0 395
AutoFact: bHLH transcription factor [Brassica napus] 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene10521 biogeco2 v2.0 325
AutoFact: Basic helix-loop-helix family protein-like protein (Fragment) n=4 Tax=Picea sitchensis RepID=E0ZL73_PICSI 0.0
Blast2go: basic helix-loop-helix family protein 0.0
unknown
biog2_v2.0_unigene11345 biogeco2 v2.0 171
AutoFact: putative MYC transcription factor [Oryza sativa Japonica Group] 1.99965e-42
Blast2go: transcription factor 0.0
unknown
biog2_v2.0_unigene11473 biogeco2 v2.0 525
AutoFact: Helix-loop-helix DNA-binding [Medicago truncatula] 5.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phytochrome-interacting factor 0.0
N-terminus
biog2_v2.0_unigene11617 biogeco2 v2.0 182
AutoFact: Unassigned protein
unknown
biog2_v2.0_unigene12390 biogeco2 v2.0 332
AutoFact: BHLH transcription factor PTF1-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q6EPZ6_ORYSJ 9.94922e-44
Blast2go: transcription factor bhlh66-like 0.0
unknown
biog2_v2.0_unigene12573 biogeco2 v2.0 432
AutoFact: Helix-loop-helix protein 1A n=1 Tax=Pinus taeda RepID=Q9SQ79_PINTA 0.0
FL-Next: tr=Helix-loop-helix protein 1A; Pinus taeda (Loblolly pine). 0.0
Blast2go: dna binding 0.0
Internal
biog2_v2.0_unigene13596 biogeco2 v2.0 165
AutoFact: Helix-loop-helix DNA-binding n=2 Tax=Medicago truncatula RepID=Q2HVX8_MEDTR 0.0
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene13868 biogeco2 v2.0 429
AutoFact: Myc2 bHLH protein n=2 Tax=Vitis vinifera RepID=A6NAB4_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Internal
biog2_v2.0_unigene14494 biogeco2 v2.0 380
AutoFact: Basic helix-loop-helix family protein-like protein (Fragment) n=4 Tax=Picea sitchensis RepID=E0ZL73_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: basic helix-loop-helix family protein 0.0
Internal
biog2_v2.0_unigene14624 biogeco2 v2.0 143
AutoFact: Myc2 bHLH protein n=2 Tax=Vitis vinifera RepID=A6NAB4_VITVI 0.0
Blast2go: transcription factor bhlh13 0.0
unknown
biog2_v2.0_unigene15489 biogeco2 v2.0 350
AutoFact: Helix-loop-helix DNA-binding [Medicago truncatula] 5.0e-32
Blast2go: phytochrome-interacting factor 0.0
unknown
biog2_v2.0_unigene15705 biogeco2 v2.0 412
AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 4.0e-29
Blast2go: bhlh transcription factor 0.0
Putative coding
biog2_v2.0_unigene15913 biogeco2 v2.0 493
AutoFact: BHLH-like DNA binding protein n=2 Tax=Vitis vinifera RepID=B7SNG3_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor tt8 0.0
N-terminus
biog2_v2.0_unigene16321 biogeco2 v2.0 551
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor egl1 0.0
C-terminus
biog2_v2.0_unigene16913 biogeco2 v2.0 408
AutoFact: Unassigned protein
Coding
biog2_v2.0_unigene17188 biogeco2 v2.0 394
AutoFact: transcription factor FAMA [Arabidopsis thaliana] sp|Q56YJ8.1|FAMA_ARATH RecName: Full=Transcription factor FAMA; AltName: Full=Basic helix-loop-helix protein 97; Short=AtbHLH97; Short=bHLH 97; AltName: Full=Transcription factor EN 14; AltName: Full=bHLH t 6.02558e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bhlh96-like 0.0
C-terminus
biog2_v2.0_unigene18071 biogeco2 v2.0 398
AutoFact: transcription factor bHLH76 [Arabidopsis thaliana] gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana] emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana] gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana] 3.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bhlh76 0.0
C-terminus
biog2_v2.0_unigene18628 biogeco2 v2.0 1113
AutoFact: pfam00010, HLH, Helix-loop-helix DNA-binding domain 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bhlh35 2.53127e-16
Putative Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain