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Assembly Name: biogeco2 v2.0

Name: DNA topoisomerase, type IIA, conserved site

Term: IPR018522  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene381 biogeco2 v2.0 997
AutoFact: Putative Rho GDP dissociation inhibitor n=1 Tax=Nicotiana tabacum RepID=Q9M404_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rho gdp-dissociation 0.0
Complete
biog2_v2.0_unigene386 biogeco2 v2.0 1257
AutoFact: xyloglucan endotransglycosylase/hydrolase precursor XTH-30 [Populus tremula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: xyloglucan endotransglucosylase hydrolase protein 9 0.0
Complete
biog2_v2.0_unigene1429 biogeco2 v2.0 1174
AutoFact: ABC transporter family protein n=2 Tax=Malpighiales RepID=B9GL16_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter family protein 0.0
N-terminus
biog2_v2.0_unigene2083 biogeco2 v2.0 1188
AutoFact: Xyloglucan endotransglucosylase/hydrolase protein 9, putative n=1 Tax=Ricinus communis RepID=B9S9N2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: xyloglucan endotransglucosylase hydrolase protein 9 0.0
Complete
biog2_v2.0_unigene2290 biogeco2 v2.0 253
AutoFact: DNA topoisomerase II, putative n=1 Tax=Ricinus communis RepID=B9RVN3_RICCO 7.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna topoisomerase 0.0
Internal
biog2_v2.0_unigene2773 biogeco2 v2.0 1016
AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna topoisomerase ii 0.0
Internal
biog2_v2.0_unigene3071 biogeco2 v2.0 592
AutoFact: Serine/threonine-protein phosphatase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TP64_VITVI 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine protein phosphatase 0.0
Internal
biog2_v2.0_unigene3465 biogeco2 v2.0 555
AutoFact: AINTEGUMENTA-like protein n=1 Tax=Pinus thunbergii RepID=Q76H96_PINTH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 domain-containing transcription factor 0.0
N-terminus
biog2_v2.0_unigene4206 biogeco2 v2.0 1667
AutoFact: Pollen tube RhoGDI2 n=1 Tax=Nicotiana tabacum RepID=Q1ZZN8_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog2_v2.0_unigene5469 biogeco2 v2.0 1082
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 0.0
FL-Next: tr=Pollen major allergen No.121 isoform 1; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Blast2go: probable xyloglucan endotransglucosylase hydrolase protein 23 0.0
Complete
biog2_v2.0_unigene5493 biogeco2 v2.0 995
AutoFact: Xyloglucan endotransglycosylase n=2 Tax=Asteroideae RepID=D9I0J0_DAHPI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: xyloglucan endotransglucosylase hydrolase 0.0
Complete
biog2_v2.0_unigene6252 biogeco2 v2.0 1325
AutoFact: Xyloglucan endotransglucosylase/hydrolase protein 9, putative n=1 Tax=Ricinus communis RepID=B9S9N2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: xyloglucan endotransglucosylase hydrolase protein 9 0.0
Complete
biog2_v2.0_unigene7445 biogeco2 v2.0 505
AutoFact: Serine/threonine-protein phosphatase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TP64_VITVI 0.0
Blast2go: serine threonine protein phosphatase 0.0
unknown
biog2_v2.0_unigene8471 biogeco2 v2.0 456
AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna topoisomerase ii 0.0
Internal
biog2_v2.0_unigene10934 biogeco2 v2.0 331
AutoFact: Serine/threonine-protein phosphatase n=1 Tax=Picea sitchensis RepID=C0PPR8_PICSI 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine protein phosphatase pp1 0.0
Internal
biog2_v2.0_unigene11424 biogeco2 v2.0 376
AutoFact: DNA gyrase subunit B, chloroplastic/mitochondrial n=1 Tax=Nicotiana benthamiana RepID=GYRB_NICBE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna gyrase subunit b 0.0
Internal
biog2_v2.0_unigene11539 biogeco2 v2.0 214
AutoFact: Putative Rho GDP dissociation inhibitor n=1 Tax=Nicotiana tabacum RepID=Q9M404_TOBAC 0.0
Blast2go: rho gdp-dissociation 0.0
unknown
biog2_v2.0_unigene11791 biogeco2 v2.0 387
AutoFact: [G] COG2273 Beta-glucanase/Beta-glucan synthetase 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: brassinosteroid-regulated protein bru1-like 0.0
Internal
biog2_v2.0_unigene11804 biogeco2 v2.0 254
AutoFact: Serine/threonine-protein phosphatase n=1 Tax=Picea sitchensis RepID=C0PPR8_PICSI 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine protein phosphatase pp1 0.0
N-terminus
biog2_v2.0_unigene12860 biogeco2 v2.0 324
AutoFact: putative AP2 domain transcription factor [Arabidopsis thaliana] 0.0
Blast2go: ap2-like ethylene-responsive transcription factor 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain