Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Beta tubulin, autoregulation binding site

Term: IPR013838  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene9818 biogeco2 v2.0 788
AutoFact: putative RNA-binding protein RBP37 [Oryza sativa Japonica Group] dbj|BAG24017.1| RNA-binding protein [Oryza sativa Japonica Group] dbj|BAG95850.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEE67936.1| hypothetical protein OsJ_25822 [Oryza s 0.0
Blast2go: rna-binding protein 0.0
Coding
biog2_v2.0_unigene9844 biogeco2 v2.0 259
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 5.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ctc-interacting domain 11 protein 0.0
Putative N-terminus
biog2_v2.0_unigene9946 biogeco2 v2.0 348
AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 6.0e-30
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: retrotransposon gag protein 1.13055e-34
Internal
biog2_v2.0_unigene10051 biogeco2 v2.0 762
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
biog2_v2.0_unigene10060 biogeco2 v2.0 334
AutoFact: Protein phosphatase 2c, putative n=1 Tax=Ricinus communis RepID=B9SNB4_RICCO 6.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 2c-like protein 1.50142e-30
Internal
biog2_v2.0_unigene10168 biogeco2 v2.0 375
AutoFact: Putative copper-transporting ATPase 3 n=13 Tax=Camelineae RepID=AHM7_ARATH 0.0
Blast2go: heavy metal p-type atpase 0.0
unknown
biog2_v2.0_unigene10169 biogeco2 v2.0 416
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 5.0e-08
Blast2go: ctc-interacting domain 11 protein 0.0
unknown
biog2_v2.0_unigene10930 biogeco2 v2.0 459
AutoFact: putative protein phosphatase 2C 63 [Arabidopsis thaliana] sp|O81760.1|P2C63_ARATH RecName: Full=Probable protein phosphatase 2C 63; Short=AtPP2C63 gb|AAK50092.1|AF372953_1 AT4g33920/F17I5_110 [Arabidopsis thaliana] emb|CAA19874.1| putative protein [Arabid 0.0
Blast2go: probable protein phosphatase 2c 63-like 0.0
unknown
biog2_v2.0_unigene11013 biogeco2 v2.0 313
AutoFact: protein phosphatase 2C (PP2C) [Fagus sylvatica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 0.0
Internal
biog2_v2.0_unigene11122 biogeco2 v2.0 295
AutoFact: Somatic embryogenesis receptor-like kinase 1 n=2 Tax=Coniferales RepID=D1MEH6_9CONI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: somatic embryogenesis receptor kinase 0.0
C-terminus
biog2_v2.0_unigene11133 biogeco2 v2.0 353
AutoFact: leucine-rich repeat receptor-like kinase [Ipomoea batatas] 0.0
FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Pinus massoniana. 0.0
Blast2go: brassinosteroid insensitive 1-associated receptor kinase 1 0.0
Internal
biog2_v2.0_unigene11218 biogeco2 v2.0 331
AutoFact: leucine-rich repeat receptor-like kinase [Ipomoea batatas] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: brassinosteroid insensitive 1-associated receptor kinase 1 0.0
C-terminus
biog2_v2.0_unigene11380 biogeco2 v2.0 385
AutoFact: protein phosphatase 2C (PP2C) [Fagus sylvatica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 0.0
C-terminus
biog2_v2.0_unigene11561 biogeco2 v2.0 504
AutoFact: SIN3 component, histone deacetylase complex n=1 Tax=Populus trichocarpa RepID=B9HLV3_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
N-terminus
biog2_v2.0_unigene11573 biogeco2 v2.0 120
AutoFact: RecName: Full=Cytochrome P450 720B2; AltName: Full=Cytochrome P450 CYPB gb|AAX07432.1| cytochrome P450 CYPB [Pinus taeda] 0.0
FL-Next: tr=CYP720B12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: c72b2_pinta ame: full=cytochrome p450 720b2 ame: full=cytochrome p450 cypb 0.0
Internal
biog2_v2.0_unigene11986 biogeco2 v2.0 291
AutoFact: putative RNA-binding protein RBP37 [Oryza sativa Japonica Group] dbj|BAG24017.1| RNA-binding protein [Oryza sativa Japonica Group] dbj|BAG95850.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEE67936.1| hypothetical protein OsJ_25822 [Oryza s 0.0
Blast2go: rna-binding protein rbp37 0.0
unknown
biog2_v2.0_unigene12010 biogeco2 v2.0 420
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SJP9_RICCO 0.0
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene12142 biogeco2 v2.0 339
AutoFact: protein TRF-like 6 [Arabidopsis thaliana] gb|AEE35355.1| protein TRF-like 6 [Arabidopsis thaliana] 0.0
FL-Next: sp=Telomere repeat-binding protein 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: myb family transcription factor 0.0
Putative C-terminus
biog2_v2.0_unigene12343 biogeco2 v2.0 281
AutoFact: Myosin class 11-2 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX0_ADICA 0.0
FL-Next: tr=Myosin class 11-2; Adiantum capillus-veneris (Maidenhair fern). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene12345 biogeco2 v2.0 544
AutoFact: leucine-rich repeat receptor-like kinase [Ipomoea batatas] 0.0
FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Pinus massoniana. 0.0
Blast2go: brassinosteroid insensitive 1-associated receptor kinase 1 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain