Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Small GTP-binding protein domain

Term: IPR005225  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog2_v2.0_unigene12294 biogeco2 v2.0 392
• AutoFact: Elongation factor 1-alpha, putative n=1 Tax=Ricinus communis RepID=B9SPP6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: elongation factor 1-alpha 0.0
C-terminus
biog2_v2.0_unigene12558 biogeco2 v2.0 431
• AutoFact: Ras-related protein RABA4d n=2 Tax=Arabidopsis RepID=RAA4D_ARATH 0.0
• Blast2go: rab11 -family small gtpase 0.0
unknown
biog2_v2.0_unigene12766 biogeco2 v2.0 218
• AutoFact: Ras-related protein RABA2a [Arabidopsis thaliana] sp|O04486.1|RAA2A_ARATH RecName: Full=Ras-related protein RABA2a; Short=AtRABA2a; AltName: Full=Ras-related protein Rab11C; Short=AtRab11C; Flags: Precursor gb|AAB60720.1| Strong similarity to A. thaliana 0.0
• Blast2go: rab11 -family small gtpase 0.0
Coding
biog2_v2.0_unigene13795 biogeco2 v2.0 311
• AutoFact: Mitochondrial elongation factor G [Oryza sativa Japonica Group] gb|EAZ27513.1| hypothetical protein OsJ_11462 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: elongation factor g 0.0
Internal
biog2_v2.0_unigene14041 biogeco2 v2.0 221
• AutoFact: P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] ref|NP_001031270.1| P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] ref|NP_001031271.1| P-loop containing nucleoside triphospha 0.0
• Blast2go: p-loop containing nucleoside triphosphate hydrolase-like protein 0.0
unknown
biog2_v2.0_unigene14253 biogeco2 v2.0 258
• AutoFact: Translation elongation factor, putative n=1 Tax=Ricinus communis RepID=B9RPP6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: elongation factor ef-2 0.0
Internal
biog2_v2.0_unigene14272 biogeco2 v2.0 166
• AutoFact: ARF-like GTPase n=1 Tax=Selaginella moellendorffii RepID=D8R3K8_SELML 0.0
• FL-Next: tr=ADP-ribosylation factor, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: adp-ribosylation factor c1 0.0
C-terminus
biog2_v2.0_unigene14468 biogeco2 v2.0 376
• AutoFact: Rop2, RHO family GTPase (Fragment) n=1 Tax=Selaginella moellendorffii RepID=D8T9D8_SELML 9.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rho family gtpase 2.88526e-12
C-terminus
biog2_v2.0_unigene14513 biogeco2 v2.0 408
• AutoFact: GTP-binding protein engA (Fragment) n=1 Tax=Populus trichocarpa RepID=B9HNV9_POPTR 0.0
• FL-Next: sp=Probable tRNA modification GTPase mnmE; Cyanidium caldarium. Plastid; Chloroplast. 0.0
• Blast2go: gtp-binding protein 0.0
Internal
biog2_v2.0_unigene14587 biogeco2 v2.0 196
• AutoFact: GTP-binding protein 1 [Arabidopsis thaliana] ref|NP_851175.1| GTP-binding protein 1 [Arabidopsis thaliana] gb|AAA87882.1| GTP-binding protein ATGB1 [Arabidopsis thaliana] dbj|BAA97464.1| GTP-binding protein-like [Arabidopsis thaliana] gb|AAO42836.1| At5g5 0.0
• Blast2go: arf-like gtpase 0.0
unknown
biog2_v2.0_unigene14597 biogeco2 v2.0 124
• AutoFact: GTPase [Glycine max] 0.0
• Blast2go: ras-related protein raba5d-like 0.0
unknown
biog2_v2.0_unigene14707 biogeco2 v2.0 435
• AutoFact: GTP-binding protein era, putative n=1 Tax=Ricinus communis RepID=B9S6C9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gtpase era-like 0.0
Putative N-terminus
biog2_v2.0_unigene15138 biogeco2 v2.0 233
• AutoFact: Translation initiation factor IF-2 n=1 Tax=Ricinus communis RepID=B9T3K8_RICCO 0.0
• Blast2go: translation initiation factor if-2 0.0
unknown
biog2_v2.0_unigene15168 biogeco2 v2.0 1022
• AutoFact: Ras-related protein RIC1 n=7 Tax=commelinids RepID=RIC1_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rab family gtpase 0.0
Complete
biog2_v2.0_unigene15362 biogeco2 v2.0 431
• AutoFact: Putative GTP-binding protein [Arabidopsis thaliana] 2.00386e-43
• FL-Next: tr=GTP binding protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
• Blast2go: elongation factor-like protein 0.0
N-terminus
biog2_v2.0_unigene15532 biogeco2 v2.0 315
• AutoFact: GTP-binding protein 1 [Arabidopsis thaliana] ref|NP_851175.1| GTP-binding protein 1 [Arabidopsis thaliana] gb|AAA87882.1| GTP-binding protein ATGB1 [Arabidopsis thaliana] dbj|BAA97464.1| GTP-binding protein-like [Arabidopsis thaliana] gb|AAO42836.1| At5g5 0.0
• Blast2go: arf-like gtpase 0.0
unknown
biog2_v2.0_unigene15538 biogeco2 v2.0 129
• AutoFact: Mitochondrial Rho GTPase n=2 Tax=Selaginella moellendorffii RepID=D8RQC7_SELML 0.0
• FL-Next: sp=Mitochondrial Rho GTPase; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: protein 0.0
Internal
biog2_v2.0_unigene15554 biogeco2 v2.0 327
• AutoFact: PREDICTED: similar to ADP-ribosylation factor 1 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000587A84 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: adp-ribosylation factor 3 0.0
Internal
biog2_v2.0_unigene15581 biogeco2 v2.0 319
• AutoFact: GTP-binding protein [Cicer arietinum] 0.0
• Blast2go: gtp-binding nuclear protein ran-3-like 0.0
unknown
biog2_v2.0_unigene15648 biogeco2 v2.0 661
• AutoFact: Translation elongation factor G, putative n=1 Tax=Ricinus communis RepID=B9RBP7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: elongation factor chloroplastic-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain