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Assembly Name: biogeco2 v2.0

Name: Small GTPase superfamily

Term: IPR001806  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene11873 biogeco2 v2.0 268
AutoFact: RecName: Full=Ras-related protein Rab2BV emb|CAA89049.1| small G protein [Beta vulgaris subsp. vulgaris] 0.0
Blast2go: rab11 -family small gtpase 0.0
unknown
biog2_v2.0_unigene12558 biogeco2 v2.0 431
AutoFact: Ras-related protein RABA4d n=2 Tax=Arabidopsis RepID=RAA4D_ARATH 0.0
Blast2go: rab11 -family small gtpase 0.0
unknown
biog2_v2.0_unigene12766 biogeco2 v2.0 218
AutoFact: Ras-related protein RABA2a [Arabidopsis thaliana] sp|O04486.1|RAA2A_ARATH RecName: Full=Ras-related protein RABA2a; Short=AtRABA2a; AltName: Full=Ras-related protein Rab11C; Short=AtRab11C; Flags: Precursor gb|AAB60720.1| Strong similarity to A. thaliana 0.0
Blast2go: rab11 -family small gtpase 0.0
Coding
biog2_v2.0_unigene14468 biogeco2 v2.0 376
AutoFact: Rop2, RHO family GTPase (Fragment) n=1 Tax=Selaginella moellendorffii RepID=D8T9D8_SELML 9.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rho family gtpase 2.88526e-12
C-terminus
biog2_v2.0_unigene14597 biogeco2 v2.0 124
AutoFact: GTPase [Glycine max] 0.0
Blast2go: ras-related protein raba5d-like 0.0
unknown
biog2_v2.0_unigene14707 biogeco2 v2.0 435
AutoFact: GTP-binding protein era, putative n=1 Tax=Ricinus communis RepID=B9S6C9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtpase era-like 0.0
Putative N-terminus
biog2_v2.0_unigene15168 biogeco2 v2.0 1022
AutoFact: Ras-related protein RIC1 n=7 Tax=commelinids RepID=RIC1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rab family gtpase 0.0
Complete
biog2_v2.0_unigene15538 biogeco2 v2.0 129
AutoFact: Mitochondrial Rho GTPase n=2 Tax=Selaginella moellendorffii RepID=D8RQC7_SELML 0.0
FL-Next: sp=Mitochondrial Rho GTPase; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene15730 biogeco2 v2.0 408
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
biog2_v2.0_unigene15906 biogeco2 v2.0 450
AutoFact: Protein phosphatase 2c, putative n=1 Tax=Ricinus communis RepID=B9RL74_RICCO 0.0
Blast2go: protein phosphatase 0.0
unknown
biog2_v2.0_unigene16014 biogeco2 v2.0 220
AutoFact: XPA-binding protein 1 [Arabidopsis thaliana] ref|NP_974586.1| XPA-binding protein 1 [Arabidopsis thaliana] gb|AAL31895.1|AF419563_1 AT4g21800/F17L22_260 [Arabidopsis thaliana] gb|AAN28818.1| At4g21800/F17L22_260 [Arabidopsis thaliana] gb|AEE84504.1| XPA-b 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: xpa-binding protein 1 0.0
Internal
biog2_v2.0_unigene16423 biogeco2 v2.0 232
AutoFact: Ras-related protein Rab11A n=5 Tax=Papilionoideae RepID=RB11A_LOTJA 0.0
Blast2go: gtp-binding protein 0.0
unknown
biog2_v2.0_unigene17877 biogeco2 v2.0 804
AutoFact: Rab1/RabD-family small GTPase n=7 Tax=Embryophyta RepID=A9SLS3_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rab family gtpase 0.0
Complete
biog2_v2.0_unigene18073 biogeco2 v2.0 86
AutoFact: Rab family GTPase n=3 Tax=Selaginella moellendorffii RepID=D8RE14_SELML 0.0
Blast2go: rab family gtpase 0.0
unknown
biog2_v2.0_unigene18743 biogeco2 v2.0 686
AutoFact: Rac-like GTP-binding protein 3 n=4 Tax=BEP clade RepID=RAC3_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: small gtpase 0.0
N-terminus
biog2_v2.0_unigene18749 biogeco2 v2.0 971
AutoFact: GTP binding protein [Cichorium intybus x Cichorium endivia] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtp binding protein 0.0
Complete
biog2_v2.0_unigene18930 biogeco2 v2.0 468
AutoFact: Rac-like GTP binding protein n=1 Tax=Picea mariana RepID=O65062_PICMA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rop-family small gtpase 0.0
N-terminus
biog2_v2.0_unigene19308 biogeco2 v2.0 406
AutoFact: PREDICTED: similar to guanine nucleotide regulatory protein n=1 Tax=Vitis vinifera RepID=UPI0001985FCE 0.0
Blast2go: ras-related protein raba5a-like 0.0
unknown
biog2_v2.0_unigene19381 biogeco2 v2.0 363
AutoFact: GTP binding protein [Cichorium intybus x Cichorium endivia] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtp binding protein 0.0
C-terminus
biog2_v2.0_unigene19532 biogeco2 v2.0 528
AutoFact: Rab family GTPase n=1 Tax=Selaginella moellendorffii RepID=D8SWR5_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtp binding protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain