Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Transcription factor GRAS

Term: IPR005202  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene135 biogeco2 v2.0 623
AutoFact: SCARECROW-like protein 1 n=1 Tax=Pinus radiata RepID=A3E2G2_PINRA 0.0
FL-Next: tr=SCARECROW-like protein 1; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: gras family transcription factor 0.0
Internal
biog2_v2.0_unigene1170 biogeco2 v2.0 320
AutoFact: GRAS family transcription factor n=1 Tax=Populus trichocarpa RepID=B9IAQ7_POPTR 0.0
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Blast2go: gras family transcription factor 0.0
Internal
biog2_v2.0_unigene2676 biogeco2 v2.0 2034
AutoFact: DELLA protein n=3 Tax=Malus RepID=Q0HA72_MALDO 0.0
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Blast2go: della protein 0.0
C-terminus
biog2_v2.0_unigene3319 biogeco2 v2.0 462
AutoFact: pfam03514, GRAS, GRAS family transcription factor 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chitin-inducible gibberellin-responsive protein 0.0
C-terminus
biog2_v2.0_unigene3397 biogeco2 v2.0 581
AutoFact: Chitin-inducible gibberellin-responsive protein, putative n=1 Tax=Ricinus communis RepID=B9S2N0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: scarecrow-like protein 1-like 0.0
C-terminus
biog2_v2.0_unigene3596 biogeco2 v2.0 587
AutoFact: Chitin-inducible gibberellin-responsive protein, putative n=1 Tax=Ricinus communis RepID=B9S6I2_RICCO 0.0
Blast2go: scarecrow-like protein 4-like 0.0
Putative coding
biog2_v2.0_unigene3603 biogeco2 v2.0 333
AutoFact: Chitin-inducible gibberellin-responsive protein, putative n=1 Tax=Ricinus communis RepID=B9S6I2_RICCO 0.0
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Blast2go: scarecrow-like protein 4-like 0.0
Internal
biog2_v2.0_unigene4270 biogeco2 v2.0 383
AutoFact: SCARECROW-like protein 1 n=1 Tax=Pinus radiata RepID=A3E2G2_PINRA 0.0
Blast2go: gras family transcription factor 0.0
unknown
biog2_v2.0_unigene4284 biogeco2 v2.0 456
AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 0.0
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Blast2go: gras family transcription factor 0.0
Internal
biog2_v2.0_unigene4474 biogeco2 v2.0 929
AutoFact: RVT_2 domain containing protein 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 0.0
C-terminus
biog2_v2.0_unigene5151 biogeco2 v2.0 980
AutoFact: DELLA domain GRAS family transcription factor rga-like protein n=2 Tax=Populus trichocarpa RepID=B9GV61_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: della protein 0.0
Complete
biog2_v2.0_unigene6099 biogeco2 v2.0 741
AutoFact: pfam03514, GRAS, GRAS family transcription factor 0.0
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Blast2go: chitin-inducible gibberellin-responsive protein 0.0
Internal
biog2_v2.0_unigene7266 biogeco2 v2.0 697
AutoFact: Chitin-inducible gibberellin-responsive protein, putative n=1 Tax=Ricinus communis RepID=B9S6I2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: scarecrow-like protein 4-like 0.0
C-terminus
biog2_v2.0_unigene8736 biogeco2 v2.0 445
AutoFact: Chitin-inducible gibberellin-responsive protein, putative n=1 Tax=Ricinus communis RepID=B9S2N0_RICCO 0.0
Blast2go: scarecrow-like protein 1-like 0.0
unknown
biog2_v2.0_unigene8737 biogeco2 v2.0 553
AutoFact: GRAS family transcription factor n=1 Tax=Populus trichocarpa RepID=B9IAQ7_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gras family transcription factor 0.0
C-terminus
biog2_v2.0_unigene9786 biogeco2 v2.0 293
AutoFact: SCARECROW-like protein 1 n=1 Tax=Pinus radiata RepID=A3E2G2_PINRA 0.0
FL-Next: tr=SCARECROW-like protein 1; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: gras family transcription factor 0.0
C-terminus
biog2_v2.0_unigene10090 biogeco2 v2.0 485
AutoFact: pfam03514, GRAS, GRAS family transcription factor 0.0
FL-Next: sp=Scarecrow-like protein 15; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: gras family transcription factor 0.0
C-terminus
biog2_v2.0_unigene10123 biogeco2 v2.0 605
AutoFact: SCL domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJB4_MALDO 0.0
FL-Next: tr=Short-root; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: nodulation signaling pathway 1 protein 0.0
Internal
biog2_v2.0_unigene10837 biogeco2 v2.0 483
AutoFact: GRAS family transcription factor containing protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=SCARECROW-like protein 1; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene12231 biogeco2 v2.0 566
AutoFact: Scarecrow-like 1 transcription factor (Fragment) n=1 Tax=Pinus pinaster RepID=B1PPU0_PINPS 0.0
FL-Next: tr=SCARECROW-like protein 1; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: gras family transcription factor 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain