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Assembly Name: biogeco2 v2.0

Name: Zinc finger, B-box

Term: IPR000315  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene62 biogeco2 v2.0 763
AutoFact: putative zinc-binding protein [Cryptomeria japonica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog2_v2.0_unigene958 biogeco2 v2.0 540
AutoFact: ubiquitin-protein ligase RNF14 [Arabidopsis thaliana] gb|AAF81330.1|AC007767_10 Contains similarity to ring finger protein 14 from Homo sapiens gb|NM_004290. It contains an IBR domain PF|01485 [Arabidopsis thaliana] gb|AAG60174.1|AC084110_7 hypothetical p 0.0
FL-Next: tr=OSIGBa0142I02-OSIGBa0101B20.23 protein; Oryza sativa (Rice). 0.0
Blast2go: ring finger 0.0
C-terminus
biog2_v2.0_unigene2015 biogeco2 v2.0 585
AutoFact: PLATZ transcription factor family protein [Arabidopsis thaliana] gb|ABF59218.1| unknown protein [Arabidopsis thaliana] gb|AEC06206.1| PLATZ transcription factor family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc-binding protein 0.0
C-terminus
biog2_v2.0_unigene2134 biogeco2 v2.0 523
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene2159 biogeco2 v2.0 667
AutoFact: Salt tolerance-like protein n=1 Tax=Zea mays RepID=B6U450_MAIZE 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene2680 biogeco2 v2.0 683
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger protein constans-like protein 0.0
Putative N-terminus
biog2_v2.0_unigene3214 biogeco2 v2.0 541
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SEX4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: light-regulated zinc finger protein 1 0.0
N-terminus
biog2_v2.0_unigene3898 biogeco2 v2.0 379
AutoFact: B-box type zinc finger-containing protein [Arabidopsis thaliana] gb|AAS77483.1| At5g54470 [Arabidopsis thaliana] dbj|BAD94801.1| putative protein [Arabidopsis thaliana] gb|AED96499.1| B-box type zinc finger-containing protein [Arabidopsis thaliana] 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene4536 biogeco2 v2.0 1301
AutoFact: PLATZ transcription factor family protein [Arabidopsis thaliana] gb|ABF59218.1| unknown protein [Arabidopsis thaliana] gb|AEC06206.1| PLATZ transcription factor family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc ion binding 0.0
Putative Complete
biog2_v2.0_unigene4638 biogeco2 v2.0 1643
AutoFact: zinc finger protein CONSTANS-LIKE 15 [Arabidopsis thaliana] sp|Q9C7E8.1|COL15_ARATH RecName: Full=Zinc finger protein CONSTANS-LIKE 15 gb|AAG51489.1|AC069471_20 CONSTANS family zinc finger protein, putative [Arabidopsis thaliana] gb|AAK59791.1| At1g28050/ 6.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger (b-box type) family protein 0.0
C-terminus
biog2_v2.0_unigene10574 biogeco2 v2.0 532
AutoFact: B-box type zinc finger-containing protein [Arabidopsis thaliana] gb|AAS77483.1| At5g54470 [Arabidopsis thaliana] dbj|BAD94801.1| putative protein [Arabidopsis thaliana] gb|AED96499.1| B-box type zinc finger-containing protein [Arabidopsis thaliana] 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene12007 biogeco2 v2.0 350
AutoFact: PLATZ domain containing protein 5.0e-38
Blast2go: uncharacterized protein loc100250554 0.0
unknown
biog2_v2.0_unigene12637 biogeco2 v2.0 177
AutoFact: putative zinc-binding protein [Cryptomeria japonica] 0.0
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene13591 biogeco2 v2.0 221
AutoFact: zinc-binding protein [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc ion binding 0.0
C-terminus
biog2_v2.0_unigene13730 biogeco2 v2.0 364
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SEX4_RICCO 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: light-regulated zinc finger protein 1 0.0
Internal
biog2_v2.0_unigene14485 biogeco2 v2.0 155
AutoFact: putative zinc-binding protein [Cryptomeria japonica] 0.0
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene14669 biogeco2 v2.0 570
AutoFact: CONSTANS-like protein n=14 Tax=Picea RepID=A6YS25_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: constans-like protein 0.0
Internal
biog2_v2.0_unigene14688 biogeco2 v2.0 422
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SEX4_RICCO 0.0
Blast2go: light-regulated zinc finger protein 1 0.0
unknown
biog2_v2.0_unigene15123 biogeco2 v2.0 192
AutoFact: ubiquitin-protein ligase RNF14 [Arabidopsis thaliana] gb|AAF81330.1|AC007767_10 Contains similarity to ring finger protein 14 from Homo sapiens gb|NM_004290. It contains an IBR domain PF|01485 [Arabidopsis thaliana] gb|AAG60174.1|AC084110_7 hypothetical p 0.0
FL-Next: sp=Putative E3 ubiquitin-protein ligase ARI4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ring finger 0.0
Internal
biog2_v2.0_unigene16786 biogeco2 v2.0 328
AutoFact: zinc finger protein CONSTANS-LIKE 15 [Arabidopsis thaliana] sp|Q9C7E8.1|COL15_ARATH RecName: Full=Zinc finger protein CONSTANS-LIKE 15 gb|AAG51489.1|AC069471_20 CONSTANS family zinc finger protein, putative [Arabidopsis thaliana] gb|AAK59791.1| At1g28050/ 6.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger (b-box type) family protein 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain