Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Target SNARE coiled-coil domain

Term: IPR000727  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene15404 biogeco2 v2.0 359
AutoFact: syntaxin [Glycine max] 0.0
Blast2go: syntaxin 0.0
unknown
biog2_v2.0_unigene16056 biogeco2 v2.0 134
AutoFact: syntaxin 1B/2/3 [Arabidopsis thaliana] sp|Q9SRV7.1|SY131_ARATH RecName: Full=Putative syntaxin-131; Short=AtSYP131 gb|AAF00648.1|AC009540_25 s-syntaxin-like protein [Arabidopsis thaliana] gb|AEE73995.1| syntaxin 1B/2/3 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: syntaxin 1b 2 3 0.0
Internal
biog2_v2.0_unigene16063 biogeco2 v2.0 358
AutoFact: Auxin influx carrier component n=3 Tax=Populus RepID=B9HSQ8_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aux1-like permease 0.0
Internal
biog2_v2.0_unigene16108 biogeco2 v2.0 237
AutoFact: pfam09177, Syntaxin-6_N, Syntaxin 6, N-terminal 3.0e-23
FL-Next: sp=Syntaxin-61; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene18072 biogeco2 v2.0 596
AutoFact: Syntaxin, putative n=1 Tax=Ricinus communis RepID=B9RPA3_RICCO 0.0
FL-Next: tr=Syntaxin, putative; Ricinus communis (Castor bean). 0.0
Blast2go: qa- syp3 sed5p syntaxin 5-type 0.0
N-terminus
biog2_v2.0_unigene19639 biogeco2 v2.0 341
AutoFact: Syntaxin-132 n=3 Tax=Arabidopsis RepID=SY132_ARATH 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100527540 4.46572e-13
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain