Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Histone-fold

Term: IPR009072  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene326 biogeco2 v2.0 1434
AutoFact: Ccaat-binding transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RHZ1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccaat-binding transcription 0.0
Complete
biog2_v2.0_unigene672 biogeco2 v2.0 910
AutoFact: nuclear transcription factor Y subunit B-3 [Arabidopsis thaliana] sp|O23310.1|NFYB3_ARATH RecName: Full=Nuclear transcription factor Y subunit B-3; Short=AtNF-YB-3; AltName: Full=Transcriptional activator HAP3C emb|CAB10233.1| CCAAT-binding transcription 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccaat-box binding factor hap3 0.0
Putative Complete
biog2_v2.0_unigene850 biogeco2 v2.0 610
AutoFact: Queuine tRNA-ribosyltransferase (Fragment) n=3 Tax=rosids RepID=E0CRP9_VITVI 0.0
FL-Next: sp=Queuine tRNA-ribosyltransferase; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene878 biogeco2 v2.0 790
AutoFact: Unassigned protein
Blast2go: dek domain-containing chromatin associated protein 0.0
Coding
biog2_v2.0_unigene1272 biogeco2 v2.0 553
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h2b 0.0
Putative Complete
biog2_v2.0_unigene2289 biogeco2 v2.0 1206
AutoFact: CCAAT-box binding factor HAP5 homolog [Daucus carota] 0.0
FL-Next: tr=HAP5B; Picea wilsonii. 0.0
Blast2go: nuclear transcription factor y subunit c-9 0.0
Complete
biog2_v2.0_unigene2562 biogeco2 v2.0 837
AutoFact: protein Dr1-like protein [Arabidopsis thaliana] gb|AED93121.1| protein Dr1-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein dr1-like protein 0.0
Complete
biog2_v2.0_unigene2670 biogeco2 v2.0 902
AutoFact: Calmodulin binding protein, putative n=1 Tax=Ricinus communis RepID=B9SXF3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mlo-like protein 4 0.0
N-terminus
biog2_v2.0_unigene2793 biogeco2 v2.0 478
AutoFact: Histone H3 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U534_PHYPA 3.0e-24
FL-Next: tr=Histone 3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: cenh3 5.71642e-29
C-terminus
biog2_v2.0_unigene2961 biogeco2 v2.0 529
AutoFact: nuclear factor Y, subunit C11 [Arabidopsis thaliana] gb|AAL58929.1|AF462841_1 At3g12480/MQC3.32 [Arabidopsis thaliana] dbj|BAB03155.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28786.1| At3g12480/MQC3.32 [Arabidopsis thaliana] gb|AEE75200.1| nu 4.00001e-41
Blast2go: protein 0.0
Coding
biog2_v2.0_unigene3385 biogeco2 v2.0 1025
AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bhlh transcription factor 0.0
Complete
biog2_v2.0_unigene3422 biogeco2 v2.0 886
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9P2K6_PICSI 0.0
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a-like 0.0
Complete
biog2_v2.0_unigene3697 biogeco2 v2.0 1183
AutoFact: Ccaat-binding transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RHZ1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transcription factor y subunit c-9 0.0
Complete
biog2_v2.0_unigene4310 biogeco2 v2.0 812
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
Complete
biog2_v2.0_unigene4725 biogeco2 v2.0 965
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 1.0e-24
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 8.9211e-30
Complete
biog2_v2.0_unigene4727 biogeco2 v2.0 888
AutoFact: nuclear transcription factor Y subunit B-3 [Arabidopsis thaliana] sp|O23310.1|NFYB3_ARATH RecName: Full=Nuclear transcription factor Y subunit B-3; Short=AtNF-YB-3; AltName: Full=Transcriptional activator HAP3C emb|CAB10233.1| CCAAT-binding transcription 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transcription factor y subunit b-3 0.0
Complete
biog2_v2.0_unigene4959 biogeco2 v2.0 923
AutoFact: nuclear transcription factor Y subunit B-8 [Arabidopsis thaliana] ref|NP_973617.1| nuclear transcription factor Y subunit B-8 [Arabidopsis thaliana] ref|NP_001031500.1| nuclear transcription factor Y subunit B-8 [Arabidopsis thaliana] sp|Q8VYK4.1|NFYB8_AR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccaat-box binding factor hap3 0.0
Putative Complete
biog2_v2.0_unigene4982 biogeco2 v2.0 998
AutoFact: Histone H3 n=2 Tax=Pediculus humanus corporis RepID=E0V960_PEDHC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h3 0.0
Complete
biog2_v2.0_unigene5121 biogeco2 v2.0 891
AutoFact: Histone H2A n=1 Tax=Populus trichocarpa RepID=B9I7E7_POPTR 2.0e-35
FL-Next: sp=Histone H2A; Pinus taeda (Loblolly pine). 0.0
Blast2go: histone h2a-like protein 0.0
Complete
biog2_v2.0_unigene5275 biogeco2 v2.0 960
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NTX3_PICSI 9.80909e-45
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain