Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco2 v2.0

Name: Histone-fold

Term: IPR009072  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene15882 biogeco2 v2.0 205
AutoFact: Histone H2B.2 n=33 Tax=Spermatophyta RepID=H2B2_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
N-terminus
biog2_v2.0_unigene15896 biogeco2 v2.0 245
AutoFact: Ccaat-binding transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RHZ1_RICCO 0.0
Blast2go: ccaat-binding transcription 0.0
Putative coding
biog2_v2.0_unigene15963 biogeco2 v2.0 510
AutoFact: nuclear transcription factor Y subunit C-1 [Arabidopsis thaliana] sp|Q9SMP0.1|NFYC1_ARATH RecName: Full=Nuclear transcription factor Y subunit C-1; Short=AtNF-YC-1; AltName: Full=Transcriptional activator HAP5A emb|CAB62348.1| transcription factor Hap5a [ 9.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene15970 biogeco2 v2.0 407
AutoFact: TATA binding protein associated factor n=1 Tax=Solanum tuberosum RepID=Q3LHL0_SOLTU 7.0e-37
Blast2go: transcription initiation factor tfiid subunit a 4.14924e-42
Putative coding
biog2_v2.0_unigene16785 biogeco2 v2.0 423
AutoFact: Nuclear transcription factor Y subunit C-2 n=2 Tax=Arabidopsis RepID=NFYC2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transcription factor y subunit c-2 0.0
Putative Complete
biog2_v2.0_unigene17213 biogeco2 v2.0 439
AutoFact: Isoform 2 of Probable carboxylesterase 11 n=1 Tax=Arabidopsis thaliana RepID=Q9LK21-2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable carboxylesterase 11-like 0.0
Internal
biog2_v2.0_unigene17303 biogeco2 v2.0 561
AutoFact: transcription initiation factor TFIID subunit D9 [Arabidopsis thaliana] gb|AAF65405.1|AF238326_1 putative TATA binding protein associated factor 24kDa subunit [Arabidopsis thaliana] gb|AAK43956.1|AF370141_1 unknown protein [Arabidopsis thaliana] gb|AAK937 4.0e-38
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transcription initiation factor tfiid subunit 11 0.0
C-terminus
biog2_v2.0_unigene17852 biogeco2 v2.0 698
AutoFact: histone H4 [Hyacinthus orientalis] 1.0e-35
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h4 1.12104e-44
Complete
biog2_v2.0_unigene18071 biogeco2 v2.0 398
AutoFact: transcription factor bHLH76 [Arabidopsis thaliana] gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana] emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana] gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana] 3.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bhlh76 0.0
C-terminus
biog2_v2.0_unigene18363 biogeco2 v2.0 413
AutoFact: histone H4 [Hyacinthus orientalis] 3.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Complete
biog2_v2.0_unigene18552 biogeco2 v2.0 327
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 1.0e-24
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 1.71789e-30
C-terminus
biog2_v2.0_unigene18569 biogeco2 v2.0 804
AutoFact: Histone H3 n=3 Tax=Eukaryota RepID=B6SJQ5_MAIZE 0.0
FL-Next: tr=Histone 3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h3 0.0
Complete
biog2_v2.0_unigene18600 biogeco2 v2.0 732
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h2b 0.0
Complete
biog2_v2.0_unigene18619 biogeco2 v2.0 613
AutoFact: Histone H2A.6 n=6 Tax=Spermatophyta RepID=H2A6_ARATH 7.0e-35
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a-like protein 1.96182e-44
Complete
biog2_v2.0_unigene18729 biogeco2 v2.0 758
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 0.0
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone 2 0.0
Complete
biog2_v2.0_unigene18794 biogeco2 v2.0 607
AutoFact: histone H4 [Hyacinthus orientalis] 6.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Complete
biog2_v2.0_unigene18797 biogeco2 v2.0 617
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NTX3_PICSI 4.06377e-44
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 0.0
Complete
biog2_v2.0_unigene18854 biogeco2 v2.0 356
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
C-terminus
biog2_v2.0_unigene19045 biogeco2 v2.0 461
AutoFact: Histone H3 n=2 Tax=Pediculus humanus corporis RepID=E0V960_PEDHC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h3 0.0
Putative Complete
biog2_v2.0_unigene19047 biogeco2 v2.0 563
AutoFact: histone H4 [Hyacinthus orientalis] 2.0e-38
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h4 0.0
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain